Polaromonas vacuolata: HC248_01121
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Entry
HC248_01121 CDS
T06542
Symbol
pilY1_2
Name
(GenBank) Type IV pilus biogenesis factor PilY1
KO
K02674
type IV pilus assembly protein PilY1
Organism
pvac
Polaromonas vacuolata
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvac02044
]
HC248_01121 (pilY1_2)
02035 Bacterial motility proteins [BR:
pvac02035
]
HC248_01121 (pilY1_2)
Secretion system [BR:
pvac02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
HC248_01121 (pilY1_2)
Bacterial motility proteins [BR:
pvac02035
]
Pilus system
Pilus assembly proteins
HC248_01121 (pilY1_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
QJC55838
UniProt:
A0A6H2H7J9
LinkDB
All DBs
Position
complement(1188370..1192626)
Genome browser
AA seq
1418 aa
AA seq
DB search
MKPFALKKMLSCWWLIRISLPVCIGMVCSDLMGAQPLSALPPNITTNSLKPMLMLVVSKD
HTLFSPAYSDFEDLDGDGVLDTTFKPSFSYYGYFDSSKCYRYNNDLFEPDSMAQTNRTAT
DKGVRYSCPASASLWSGNFLNWASMTRLDVLRKILYGGKRSTDSLKQTLLETASLSQDSH
AFVKFYAGADIRDYTPFSTRDLTKKTGDNVNNYAGLTLCNRSALDSESGTPQLRLAKGNY
KMWATINDRSCIWADEQLDPKAANAAKLGNKLARYYSNIQAWYGGASLRHESALPTLASD
AAAYGHTGPDLTLRIKVCEPALLGQERCQKFDQASATKQTTDSNYKPYGLLQELGLPAAG
QSSAKAEIGLITGSYDRNLSAGALRKNIGDLQDEIDLKTGRFCHAANSISVDGNNPSLPP
ACASAGQGAIAALDRITLYGRQNGSYGATHQTATQMQANEGSLPAWGNPISEMVVQALNY
YAGNNDNKPPKSKDNSRGISVKNPLNPLNPLNPLNPLNPLNQSDISRVSHYGKPACRPLN
ILAISSSALSFDQEAGQLFSALPGQPELASYTQRVGSAEGINNSWRAVGIGNTLNGKFGQ
DCSAKYVTNLADVSGICPEAPALGGSYHIAGAALYGNTHKIQNLSLPADAPAHALTVKTM
VMNLGGSTARIAVAIPHSQPQKFVYITPEGRSKNGASSMLTFSAISTSDLHGAFLVTWSD
ALFGGNHDMALTGYLRYDIIAPPSKGADYQIKITSDIVNVGGNDQAAQGYSIIGVNHANA
PSGSQQRQDSADKVYLTHGHVGVVPANAKTPTVVSMAGTLCASQDYRETTGSLNGHAIAA
GPYKAQDWPDHVATRALAKDLGLLISPCMSSLGARTIHDVDLPVVGTFNMRGAADVLLKD
PLWYAAKYGGFDTTKASSFNLSSSESLPENSWRSQRTDVQSCGDAPLAACGDDMPEGYFP
TRQPERLERQLKDRFEKIVTSANAGLTVSSSQLVVGSYKYISQFDPTLKTGSVLAYRLEA
DGNFQTTATWNAGETLKRWPWTERQIISNQATAQGKNQGISLKWNALNTAYKVALSSPDL
TGKLSRDKAEHRAQALLDYIRGDTQNEDPRGERFQARSQSNLMGTVVNAVPWLQSRPSAR
FFDALLPAGLPSYAAFSATYAQREKLLWVGANDGMLHAFKANTGTPVISFLPGMLAALLP
DLAKPTAAISAGMDGNPFSGDVITSQTSNGQPSWASYLFASLGRGAKGVFALAVTDPSQL
VESNAAAIFKWQFTPTDDSDMGHVLSEPGVNHFSGQASPIVQLNNGKWAVLIPNGVNSAN
GNAALFVLGVDGPDSSGVWRINNDYYKLLPLGQDSGNGMMGVSWIDIDNNGTADYAFATD
LKGNVWKFDLSSSDPRNWGSAFKKKRPKSSFLYGQNRQ
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatttgctctgaaaaaaatgttgtcttgctggtggctaataagaatttctcta
ccagtttgcattggcatggtttgcagcgatcttatgggtgcccagccgctatctgcccta
ccgcccaacatcaccacaaacagtcttaaacccatgttgatgttggtcgtatccaaagac
cacacactgttttcaccggcctatagcgacttcgaggatttagatggcgatggtgtttta
gacaccacgttcaaaccaagctttagctattacggttattttgattccagcaaatgctac
aggtataacaatgacctttttgagccagacagcatggcacagactaaccgtacagcaacg
gacaaaggcgtgcgctatagttgccctgccagcgccagtttgtggagtggaaacttcttg
aactgggccagtatgacgcggctagatgtcctgcgcaagattctgtatggcggcaagcgc
agcaccgacagcctaaaacaaaccctactggagactgctagcttgagccaggactcacac
gccttcgttaagttttacgctggggcagatatccgcgactacaccccgttctcgacccgt
gatctgaccaaaaaaaccggcgacaacgtgaataactacgccgggttaacgctttgcaac
cgctcagcgcttgacagcgaatcgggcacaccgcaattacgcctagccaaaggcaattac
aaaatgtgggccacgatcaacgaccgcagctgcatctgggctgacgagcaacttgaccct
aaggcggccaatgctgccaagcttggcaataagctggcacgttattacagcaacatccaa
gcctggtatggaggcgccagcttgagacatgaatccgccctccccaccctagcaagcgat
gccgccgcatacggccacacaggcccagacttaacgctgcgcatcaaggtttgcgagccc
gcactactaggccaagaacgctgtcaaaaatttgaccaagccagcgcgaccaagcaaacc
acagacagcaactacaagccctatggcttactacaagaattgggcctccccgctgccggt
caaagcagtgcaaaagcagaaatcggcctgatcaccggcagctatgaccgcaacctcagc
gccggtgctttgcgcaaaaatatcggcgatttacaagatgagattgacctcaaaaccggg
cgtttttgccatgcagccaacagtatttcagtcgacggcaacaaccccagtttgccgccc
gcttgcgccagcgccggccaaggtgcgattgcggcgctagaccgcataacgctttatggc
cggcaaaatggtagttatggcgcgactcaccaaacagcgactcaaatgcaggccaacgaa
ggcagcctgcccgcttggggcaatccgataagcgaaatggtggtgcaagcgctgaattat
tacgctggcaataacgacaacaagccgccgaaaagtaaagacaacagccgcggcatcagc
gtcaaaaatccgcttaatccgcttaatccgcttaatccgcttaatccgcttaatccgctt
aatcaaagcgatattagccgagtgagccactacggcaaaccagcttgccgaccgctaaac
atactggccatctctagcagcgcgttgagctttgaccaagaggctggccaactcttttca
gcgctacctggccaacctgaactggctagctacacccagcgcgtgggcagcgcagaaggc
ataaacaacagctggcgagccgtcggtattggcaacactttaaacggcaaatttggccaa
gactgcagcgctaaatacgtgaccaatctagccgatgtcagtggcatttgcccagaagca
ccagctctaggcggctcctaccatatagctggcgcagcgctttatggcaacacacacaag
atacaaaacctaagcctgcctgccgatgcgccagcccacgcattaacggtcaaaaccatg
gtcatgaatttgggcggcagtactgcacgtatagccgtagccataccccacagtcaaccg
caaaagtttgtctacatcacgccagaaggtcggtcaaaaaacggcgcttcgtcaatgctg
actttttctgcgattagcacgtccgacctacacggcgcttttttggtcacttggagcgat
gcgctgtttggcggcaaccatgacatggctctcaccggctacttgcgttacgacatcatc
gcgccgccaagcaaaggcgccgactaccaaataaaaattactagcgacatcgtcaatgta
ggcggtaacgaccaagccgcgcagggttacagcatcatcggcgtaaaccacgccaacgca
ccgtccggcagccagcaaagacaagactcggcagacaaggtctacctcacacacggccat
gtcggggtcgtgccagcgaatgcaaaaacgcctactgttgttagcatggcaggcacactg
tgcgccagccaagactatcgcgaaacaacaggcagccttaacgggcatgccattgccgct
ggaccttataaagcccaagactggccagaccacgtcgccacacgcgcactggcaaaagat
ttaggcctactcattagtccctgcatgagtagcttaggcgcgcgcaccatccacgatgta
gacctacccgttgtcggcaccttcaacatgcgtggcgcagcagatgtattgcttaaagac
ccactttggtacgccgcaaaatatggtggcttcgacacaaccaaagccagcagttttaac
ctcagcagcagcgagtctttgcccgaaaattcatggcgtagccagcgtacagacgtccag
tcttgtggcgatgcaccgctggcagcttgcggcgacgacatgcctgagggctacttccca
acccgccagccagagcggctagagcgccagctcaaagacagatttgaaaaaattgtcaca
tcagcaaatgcaggactaacagtctcatccagtcagttagtggtcggtagttataaatac
atcagccaattcgacccaacgcttaaaaccggttcagtactggcttaccgactcgaagca
gatggaaattttcaaaccacagcgacttggaacgccggcgagacactcaagcgatggcca
tggacagaacgacaaatcattagcaaccaagcgactgcacaaggtaaaaatcaaggcata
agtttgaaatggaatgcacttaacaccgcatacaaagtcgcgttaagcagcccagacctg
actggcaaattgagtcgcgataaagccgaacatcgcgcccaagctttgctggactatatt
cgcggcgacacccaaaacgaagacccacgcggcgagcgcttccaggcgcgcagccaaagc
aatttaatgggcactgtcgtgaacgccgtaccttggcttcaaagcaggccaagcgcacgg
ttttttgatgcactgctacccgctggcctgccttcttacgcggcgttttctgcgacctat
gcgcaacgggaaaaactactctgggtaggcgctaatgacggcatgctgcatgcctttaaa
gccaatacgggtacacccgtcatatcttttttgccgggtatgttggcagcattgctgccc
gatttagcaaagcccacggcagccattagcgcgggcatggacggcaatccatttagcggt
gatgtgatcaccagccaaaccagtaacggccaaccgagttgggccagctatctttttgcc
agtctggggcgcggcgcaaaaggggtttttgcattggccgtaactgacccaagccagctg
gtcgaatccaatgccgcagcgatttttaagtggcaattcacgccaactgatgacagcgat
atgggccatgttttaagcgaacccggcgttaaccatttcagcggccaagcctcacccata
gttcagctgaacaacggcaagtgggcggtgctcattcccaatggcgtgaactctgccaac
ggtaacgcagcactttttgttcttggcgttgacggcccagacagtagcggtgtttggcgc
atcaataacgactactacaaacttttaccgttaggccaagacagcggcaacggcatgatg
ggtgtgagctggatagacatagacaacaacggcacggcagactacgccttcgccaccgac
ctaaagggcaatgtctggaaattcgatttaagcagcagcgatccacgaaattggggttcc
gcctttaaaaaaaaacggcctaagtcttcctttttatacggccaaaaccgccaatga
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