Polaromonas vacuolata: HC248_01127
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Entry
HC248_01127 CDS
T06542
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pvac
Polaromonas vacuolata
Pathway
pvac00260
Glycine, serine and threonine metabolism
pvac00460
Cyanoamino acid metabolism
pvac00630
Glyoxylate and dicarboxylate metabolism
pvac00670
One carbon pool by folate
pvac00680
Methane metabolism
pvac01100
Metabolic pathways
pvac01110
Biosynthesis of secondary metabolites
pvac01120
Microbial metabolism in diverse environments
pvac01200
Carbon metabolism
pvac01230
Biosynthesis of amino acids
pvac01240
Biosynthesis of cofactors
pvac04981
Folate transport and metabolism
Module
pvac_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HC248_01127 (glyA)
09102 Energy metabolism
00680 Methane metabolism
HC248_01127 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HC248_01127 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HC248_01127 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HC248_01127 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HC248_01127 (glyA)
Enzymes [BR:
pvac01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HC248_01127 (glyA)
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GFIT
Motif
Pfam:
SHMT
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QJC55844
UniProt:
A0A6H2H8C5
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All DBs
Position
complement(1196349..1197593)
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AA seq
414 aa
AA seq
DB search
MYHRDILIEQTDPEIFAAIQAENKRQEQHIELIASENYASPAVMAAQGSQLTNKYAEGYP
GRRYYGGCEHVDIAEQLAIDRIKTLFGAEAANVQPHCGASANEAVFLAFLKPGDTILGMS
LAEGGHLTHGMSLNISGKWFNAVSYGLNDKEEIDYDAMERKAHETKPKLIIAGASAYSLK
IDFERFAKVAKDVGAIFMVDIAHYSGLVVAGVYPNPVPFADVVTSTTHKSLRGPRGGIIL
MKAEHEKAINSAIFPGLQGGPLMHVIAAKAIAFKEAMAPEFKVYQKQVLRNADIIANTLI
ERGLRIVSGRTESHVMLVDLRAKGITGKEAEAVLGSAHMTINKNAIPNDPEKPMVTSGVR
IGTPAMTTRGFKDEEARQTAMLIADVLDNPRDEANLAAVRAKVHALTTRFPVYS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaccgcgacattctcattgaacaaaccgatcctgaaatctttgccgccatacag
gccgaaaacaaacgccaagagcagcatattgagctgattgctagcgaaaactatgcctca
ccagcagtgatggccgcacaaggctcacagctaaccaacaaatacgcagaaggctatccc
ggccgccgctactacggtggctgcgagcatgttgacattgccgaacaactcgctatcgac
cgcatcaaaacactgtttggcgccgaagccgccaacgtacaaccgcattgcggtgcatcg
gctaacgaagcagtttttctggcttttctaaaaccaggtgacaccatattaggtatgagt
ttggctgaaggcggtcacttgactcacggtatgtcgctcaatatcagcggcaagtggttt
aacgccgtcagctacggtctgaacgacaaagaagaaattgactacgacgccatggagcgc
aaagcccatgagaccaagcccaagctcattattgctggtgcgtccgcttacagcttaaag
attgactttgaacgttttgccaaagtcgccaaagacgttggcgctattttcatggtcgat
attgcgcattactcaggccttgtcgtggcgggtgtttatcccaacccagttccgtttgca
gacgtcgtgacctcaaccactcacaaaagcctgcgcggcccacgcggcggcatcattttg
atgaaggccgaacatgaaaaagccattaacagcgccatcttccctggtctgcaaggtggc
ccattaatgcatgtgatcgcagccaaagcgattgcctttaaagaagcgatggcgcctgag
ttcaaggtctaccaaaagcaagtgctgcgtaacgccgacatcattgccaacaccttgatt
gagcgcggtctgcgcatagtcagcggccgtactgagagccatgtcatgctggttgattta
cgcgccaaaggcatcactggcaaagaagctgaagccgtactgggcagtgctcacatgact
atcaataagaacgccattcctaacgatccagaaaagccaatggtcaccagcggtgtgcgc
ataggcacacccgctatgacgactcgcgggttcaaagacgaagaagcgcgccaaaccgcc
atgctgattgccgacgtgctcgacaacccgcgtgacgaggctaatttggcagcagtgcgt
gcaaaagtgcatgcgctgaccactcgctttccggtttacagctaa
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