KEGG   Polaromonas vacuolata: HC248_01137
Entry
HC248_01137       CDS       T06542                                 
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
  KO
K01247  DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
pvac  Polaromonas vacuolata
Pathway
pvac03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pvac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HC248_01137 (alkA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvac03400]
    HC248_01137 (alkA)
Enzymes [BR:pvac01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     HC248_01137 (alkA)
DNA repair and recombination proteins [BR:pvac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     HC248_01137 (alkA)
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-ProteinID: QJC55854
UniProt: A0A6H2H8D4
LinkDB
Position
1209094..1209810
AA seq 238 aa
MTKTVKNASTSMLPTHLLESDAPAPPHVNTIPSYWADACVHLVKKDRVMKRLIPQFGDAC
LQSHGDAFCTLARSIVGQQISVPSAQAVWNRFVALPERMTPSHVLKLKVADMRAAGLSPR
KVEYLVDLALHFDSGSVHVTDWAAMEDEAIIAELVAIRGIARWTAEMFLIFYLMRPNVLP
LDDAGLISGISHNYFSGEAVSRSDAREVAAAWAPYCSVATWYIWRSMDSVAASTVMAA
NT seq 717 nt   +upstreamnt  +downstreamnt
atgacaaagaccgttaaaaacgcctccaccagcatgctgccaacgcatctattggagagc
gacgccccagcgccgccgcatgtgaacaccatacccagttactgggccgatgcttgcgtt
cacttagtcaaaaaagaccgtgtgatgaagcgcttgataccgcagtttggcgatgcctgt
ttgcagtctcatggcgatgctttttgcacgttggcccgaagcatagtgggtcaacagata
tccgtgccttcggcgcaagcggtgtggaaccgcttcgtggctttaccagagcgtatgacg
cccagccatgtcctcaagctcaaagtcgccgacatgcgcgccgcgggcctaagtccacgc
aaggtggaataccttgttgacttggctttgcactttgactctggcagcgttcacgtcacc
gattgggcagcgatggaggatgaagctatcattgccgagttagtggcgattcgcggcatt
gctaggtggacggctgagatgttcttgattttctacttgatgcgtccgaatgttttgccg
ttagatgacgccggtttaatcagcggcattagccacaattacttttcgggtgaagccgtt
agtcgcagcgatgcgcgtgaagtagctgccgcttgggcaccttactgcagcgtagcgact
tggtatatttggcgctccatggattctgtggccgccagcactgttatggcggcttga

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