Polaromonas vacuolata: HC248_01263
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Entry
HC248_01263 CDS
T06542
Symbol
rluB
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pvac
Polaromonas vacuolata
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvac03009
]
HC248_01263 (rluB)
Enzymes [BR:
pvac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HC248_01263 (rluB)
Ribosome biogenesis [BR:
pvac03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HC248_01263 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
QJC55979
UniProt:
A0A6H2H7X9
LinkDB
All DBs
Position
1344257..1345924
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AA seq
555 aa
AA seq
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MHDISMNENSMNPEDNPSANAQTPVTPVSQPSETAAPASTETKTSQRPTKAAPAGAASLF
DEVITGQFDADEEDVAVVLPKRVLAPQAESPKLHKVLAQAGLGSRLEMEQLIVEGRISVN
GEPAHIGQRVQFGDTVKVNGKPIRVRIDAPPPRVIAYHKPAGEVVTHDDPQNRPTVFRRL
PKLFQGKWQSVGRLDLNTEGLLLLTSSGELANQLMHPRFGLEREYAVRVLGALSNEAKKR
LLDGITLEDGMASFTTLEAGGGEGANHWYKVTLSEGRNREVRRMFEAVGHAVSRLIRIRY
GAMLLPRGLKRGAFVELDDSDIWALTSAVRQAEERGDPRAATRRGAPLRKGGEQALDADG
QQLETDEPHDPHEFQPPEPRGNTSRNAPRNAPRNDTRNAPRNAGNQRRDNNGGNSRGPGP
AGGRASGPSAYGNPARGAPRRNDNGGNTGSGQGGRNEKSQPDPMKTSFGYIGADTFTRQR
QAQGQQGQRRGGSSGGMGGSGGGGGMGGGGSSSGPRGSGGGGGRGGNRGGGFTGGGNGGG
FGGGGGRGGNRGGNR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacatcagcatgaatgaaaacagcatgaacccagaagacaatccatctgccaac
gcccagacaccggtcacgcccgtgagtcaaccatctgaaactgccgcgccggccagtact
gaaaccaagaccagtcaacgccctaccaaggccgcgccagccggtgctgccagcttgttt
gatgaagtcatcaccggccagttcgatgctgacgaagaagacgttgcagtggtattgcct
aagcgcgttttagcgccgcaggctgagagcccaaagctgcacaaggtgctggcgcaagcc
ggactcggctcgcgtttagagatggagcaactcattgtcgaaggccgtatttcggtgaat
ggcgagccggcccacatcggtcagcgcgtgcagtttggtgacaccgtcaaggtcaatggc
aagccgattcgcgtgcgtattgatgcgccgccgccgcgggtgattgcttatcacaagccg
gctggcgaggttgtcacgcatgacgatccgcaaaaccggcctacggttttccgtcgtctg
cctaagctattccaaggcaaatggcagtctgttggacggctggacttaaatactgaaggt
ttgctgcttttaaccagctcgggcgagttggcaaatcagttgatgcatccgcgctttggc
ttggagcgcgaatacgcggtgcgcgtgttgggcgcgctgagtaatgaagcaaaaaaacgt
ctgctcgatggcatcactttagaagacggcatggccagtttcaccacgctagaagctggc
ggtggtgaaggtgctaaccattggtacaaagtcacgttgtctgagggccgcaaccgcgaa
gtgcggcgcatgtttgaagccgtcggtcatgcggttagccgcttgattcgcatacgttac
ggcgccatgctactgccgcgtggacttaagcgcggggcttttgttgagctcgatgacagc
gatatttgggccttaaccagtgccgtgcgtcaggccgaagagcggggcgatccacgcgct
gctactcgccgtggcgcgccattgcgaaaaggtggtgagcaagcgttggacgctgacggc
cagcagttagagactgacgagccacacgatccgcatgaattccagccgccagagccgcgc
ggcaatacctcccgtaacgcaccccgcaatgcgccccgcaacgacacgcgcaatgcgccg
cgtaatgctggcaatcagcgccgcgacaacaatggcggcaactctcgtggtcccggtcct
gcgggtggtcgcgctagtgggccgagtgcttacggcaatcctgcacgtggcgcgccacgt
cgcaacgacaacggcggcaacactggctcgggtcagggtggacggaatgagaagtcgcaa
cccgatcctatgaaaacctcgtttggctacataggcgccgatacatttacccgtcaacgt
caggcccaaggccagcaaggtcagcgccgaggcggcagtagtggtggcatgggcggcagc
ggcggtggtggcggtatgggcggtggtggctctagcagcggcccgcgtggaagtggcggc
ggcggcggtcgcggtggtaaccggggtggcggctttaccggcggtggcaatggtggcggt
tttggcggtggcggtggtcgtggtggcaatcgcggcggtaatcgataa
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