Polaromonas vacuolata: HC248_01343
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Entry
HC248_01343 CDS
T06542
Symbol
cry2
Name
(GenBank) Cryptochrome-like protein cry2
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pvac
Polaromonas vacuolata
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvac03400
]
HC248_01343 (cry2)
Enzymes [BR:
pvac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HC248_01343 (cry2)
DNA repair and recombination proteins [BR:
pvac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HC248_01343 (cry2)
Prokaryotic type
HC248_01343 (cry2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QJC56059
UniProt:
A0A6H2H861
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All DBs
Position
complement(1468097..1469668)
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AA seq
523 aa
AA seq
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MSLPSALVWFKRDLRVHDHAPLAAAQSFAAALGLFVIEPEWLDSPDCDASHVDFALACLT
ELRQDLDKRGLPLLVRVGNAEKILTELRAKYHFTHLLSHEETGSGWSYQRDLAVGSWCRK
EQIVWQEFTQTGVIRALASRNGWAQNWQARMSTPLAVLSQRFAGQTDVALGDIPDLATLG
LPQHNKTLQAAGERAARQCLRSFLQGRGRNYRKAISSPLSAQDGCSRLSPHLAFGTLSMR
TLHQAIDACINKTDDRELAFALSSFAGRLRWHCHFMQKLESEPAIEFANFSRACDGLRPG
DIKGGATPFSVQDEINFQAWCTGHTGYPMVDACMRSLVATGWLNFRMRAMLVSFASCHLW
LHWRRTGEFLARQFLDFEPGIHWSQMQMQSGTTGINTLRIYSPAKQAQDQDPEGIFIRQW
VPELARVPLPYLAKPWTMETAVQQMSNCIIGIDYPAPIVDEKLAVKHAKDKLYTLRESPE
AKQQAGLVQNKHGSRKSGLPPSRKPSVRAKKITVQIMQGDLFA
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgccctctgccctagtttggtttaaacgcgatctgcgagtccacgatcacgca
ccattggcagcggcacaatcgtttgcagcagcacttggcctttttgtcattgaacctgaa
tggctagacagcccagactgcgacgcgagtcatgtggactttgccttagcctgtctaaca
gagctaaggcaagacctagacaagcgcgggttaccactgctggtgcgcgttggaaatgct
gaaaaaatactgacagaattgcgcgctaaatatcacttcacgcatctgcttagtcatgaa
gaaactggctctggctggtcttaccaacgtgatttagcagttggctcttggtgtagaaaa
gagcagattgtgtggcaagaatttacccaaactggggtgatacgcgccctagcctcgcgc
aatggctgggcccaaaattggcaagcgcgcatgtccacgccattagcagtactcagccaa
cgcttcgccggtcaaacagatgtagcgttaggcgatattccagacttggcaacattaggt
ctgccccagcacaacaaaacactgcaggcggcgggcgagcgcgcagcacgccaatgtctg
cgaagctttttgcaaggccgtgggcgcaactaccgcaaagccatctctagcccactcagc
gcgcaagatggttgcagtcgattaagtccacatctagcctttggcacactgtctatgcgc
acgctgcatcaggcgatagacgcttgtattaacaaaaccgatgacagagaactggccttc
gcactgagtagctttgcgggccggctacgttggcactgtcacttcatgcaaaaactcgaa
agcgaaccggccatagagtttgcaaatttctcgcgcgcctgcgatggcctcagacccggc
gatatcaagggcggcgcaacgccttttagtgtgcaagacgaaatcaattttcaagcttgg
tgtacgggacatacaggctaccccatggtggatgcctgcatgcgctcattagtcgccaca
ggttggctaaactttcgtatgcgcgccatgttggtgagctttgcatcgtgtcacttgtgg
ttgcactggcgcagaacgggcgagtttttagcgcggcagtttttggacttcgagcccggc
attcactggagccagatgcagatgcaaagtggcacaactggcatcaacaccttgcgcatt
tactcaccagccaagcaagcgcaagaccaagatccagaaggtatttttattcgccaatgg
gtaccagagctagcccgtgttcctctgccgtatttagccaaaccttggactatggagacg
gcggtgcagcagatgtcgaactgcatcattggcattgactacccggcgcccatcgtggat
gaaaaactagcggttaagcacgctaaagacaagctttacacgctacgcgaaagcccagaa
gccaagcaacaagcagggttggtacaaaacaaacatggatcgcgtaaaagtggtttgccg
ccaagtagaaaaccgagtgtgcgagcaaaaaaaatcaccgtgcaaattatgcagggtgat
ctttttgcttaa
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