Polaromonas vacuolata: HC248_01616
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Entry
HC248_01616 CDS
T06542
Symbol
lptB_6
Name
(GenBank) Lipopolysaccharide export system ATP-binding protein LptB
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
pvac
Polaromonas vacuolata
Pathway
pvac02010
ABC transporters
pvac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HC248_01616 (lptB_6)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HC248_01616 (lptB_6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvac02000
]
HC248_01616 (lptB_6)
Transporters [BR:
pvac02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
HC248_01616 (lptB_6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BCA_ABC_TP_C
AAA_21
RsgA_GTPase
SMC_N
AAA_23
AAA_29
AAA_27
Dynamin_N
AAA_15
MMR_HSR1
AAA_22
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QJC56314
UniProt:
A0A6H2H9P3
LinkDB
All DBs
Position
complement(1748782..1749528)
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AA seq
248 aa
AA seq
DB search
MSDVLLSAKNLTKRFGGLAAVEDVSIDLVRNQIHAVIGPNGAGKSTLTNLLSGDTPPTSG
TVMLGGRDVTGWKPEKISAKGLGRSYQKTNIFLSFSVWENIRLAAQSRQQHDSRLSRAQD
FSAINERAEQALEMTGLAYRRSSIASTMSHGEQRQLEIAMTLATEPQVLLLDEPLAGMGA
AEAQTMVALLLKIKRDHAMLLVEHDMDAVFALADKLTVMVNGQVIASGTPTEIRADARVQ
AAYLGEDS
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgtgttgcttagcgcaaaaaatctgactaaacgctttggtgggttggcggcg
gttgaggatgtctcgattgacttagtacgcaaccaaattcacgcggtgattggccctaac
ggtgcgggtaaatcgacactgaccaatttgctctcgggcgataccccgcccacctctggc
acggtaatgcttggcgggcgtgatgtgacgggctggaaacccgagaaaatatcggctaaa
ggcctaggccgcagctatcaaaaaacaaatatatttttgtctttcagtgtttgggaaaat
atccgactggcggcccaatcacgccaacaacacgactcacggcttagccgcgcccaagat
ttttccgctatcaacgaacgcgccgaacaagcacttgaaatgacaggactggcataccgc
cgctcaagcattgccagcaccatgagccacggtgagcaacgccaattagaaatcgccatg
accttagccaccgagccgcaggtgctattactcgatgagccgctcgcgggcatgggcgcg
gcggaagcgcaaactatggtggcattactgctaaagataaaaagagaccacgccatgctg
ttagtcgagcacgatatggacgctgtgtttgccctagcagacaaactcaccgtcatggtc
aacggtcaggtaattgccagcggcacgccaacagaaattcgcgccgatgcacgcgtgcaa
gcagcctatttgggagaggattcctga
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