Polaromonas vacuolata: HC248_01665
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Entry
HC248_01665 CDS
T06542
Symbol
smc_2
Name
(GenBank) Chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
pvac
Polaromonas vacuolata
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvac03036
]
HC248_01665 (smc_2)
Chromosome and associated proteins [BR:
pvac03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
HC248_01665 (smc_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
SMC_hinge
AAA_15
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QJC56360
UniProt:
A0A6H2H961
LinkDB
All DBs
Position
1796906..1800487
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AA seq
1193 aa
AA seq
DB search
MLGIAAQGFNTGLVVRLNSIKLAGFKSFAEPTTFILPGQLVGVVGPNGCGKSNIMDAVRW
VLGESKASELRGESMQDVIFNGTNTRKPASRSSVELVFDNADHRAGGQWGQFVEIAVKRV
LTRDGNSSYFINNQPVRRRDVQDVFLGTGLGPRAYAIIGQGTISRIIESKPEELRLFLEE
AAGVSKYKERRRETANRLSDTRENLTRVEDILRELNANLDRLEKQAAVALRYNQLNADGT
LKLHQLWFLKRGESQADQAKVKLEADKSVNALESRIADLRHIEADLETIRQAHYAAGDHV
NQAQGKLYEASAEVGRLEAEIRFVVDGRIRVEQRLIQLKEQTEQWATRSEDAAIEAETLS
EQAMEAEEKSELLAAQSQEQQSELPALEDSLRSAQTKANEQRASVVQVQQQIQVLAADQR
NIEEQSRSLSLRMERLGADKNALNAPDEARLVNLKTQFSVAQESQQEAQGRLDELSDSVP
QLDEDRRFRQQAVNTESAKRTEYSARMEALKALQEKVKTDGKLKPWLAKHGLDSLQGLWS
RLHIEQGWENALEAALRERLGALEVSRLDMVRGFAGTDGRDAPPAKLAFYAAPQAAAPAR
TNSALNLKPLADLLRLNDAGLAALLGDWLHGCYTAEKLDDALAARERLQTGEVVYVMSGH
AVTAHSVSFYAQDSEQSGLLARAQEIENLEKQLRAQTLISDEARNASARAESVYADASQR
LALARREAAEYQSRAYELQVELLRLSQLAEQTRARSEQIQSDMTETGDQLEQLQERKATA
EGRFDELDMQLADTQERHAQLDDKVIQTERKLTESREQQRSLERQLQEAQFALRSLAARR
QELARSIDIAAQQAGTIAAEEQRASEELSRLSDAAAKAGLQSALDIKLERETDMAAKRSQ
YDDLTTKLRASDERRLQLERELDPLRQRITEFQLKEQAARLGFEQYEQLLQEAQADLPAI
ELSIQNGNVRLTGLQSEIDRINREIQALGAVNLAALDELSSARERKQFLDAQSADLNEAM
NTLEDAIKKIDMETRELLSATFASVNEHFGKMFPELFGGGNARLMMTGEEILDAGVQVMA
QPPGKKNQTIHLLSGGEKALTAIALVFAIFQLNPAPFCLLDEVDAPLDDANTERYAKLVA
SMSKSTQFLFISHNKIAMEMAEQLIGVTMQEQGVSRIVAVDMEAALGFVESPA
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
ttgctaggcatagcagctcaaggctttaatacaggtttagtcgtgcgtcttaattcaatc
aagttagctgggttcaagtcatttgcagaacccaccacgtttatattgcccggccaattg
gtcggtgtggtggggcctaacggctgcggtaaatcaaacatcatggatgcggtgcgctgg
gttctgggcgagagcaaggcttccgagctgcgcggcgaatctatgcaggacgtgattttc
aacggcactaacacccgtaagcctgccagccgctctagcgttgagttggtgtttgataac
gccgaccaccgcgccggcggccagtggggccagtttgttgagatcgccgttaaacgagta
ttgactcgggatggcaattcgagctatttcatcaacaaccaaccagtgcgtaggcgcgac
gtccaagacgtttttctcggcaccggtctgggcccacgtgcttacgccatcattggtcag
ggcacgattagccgaattattgaatctaagcctgaagaattacgtctgtttttggaagag
gccgcgggtgtctccaaatacaaagagcggcgccgggaaaccgctaaccgactctcggac
acgcgtgagaacctgactcgggtggaagacattctgcgcgaactcaatgccaatttagac
cggcttgaaaagcaagcggctgtcgcgctacgctacaaccagctcaacgctgacggcacg
ctcaagctacaccagttgtggtttctcaaacgcggcgagagtcaagccgatcaggccaag
gtcaagctagaagcggataaatctgtcaatgccttagagagccgaattgccgacttgcgt
cacatagaggccgacttagaaacaattcgccaagcccactacgccgccggtgaccatgtc
aaccaagcccagggcaagctctatgaagccagtgctgaagtcggccgtttagaagcagaa
attcgctttgtggtcgatggccgcattcgcgtcgagcagcgactaattcagcttaaagag
caaaccgagcaatgggcgacgcgcagcgaagacgccgcgattgaggctgaaaccttgtcc
gaacaagccatggaggcagaagaaaagtccgaactactcgccgcccaaagccaggagcag
caaagcgaattgccagcattggaagacagcttgcgcagcgcgcaaaccaaggctaacgag
caacgcgccagcgtggttcaggtgcagcagcaaattcaggtgttggctgcggatcaacga
aatatcgaagagcagtcacgcagtctgtcactcaggatggagcgtttgggcgcggataaa
aacgccctcaacgcacccgacgaggcgcggctagtcaatctcaaaacccaatttagcgtg
gcccaagaaagccagcaagaagcgcaaggccgactcgatgaattgagcgacagcgtgccc
cagttagatgaagacaggcgttttcgccagcaagcggttaataccgagtccgctaagcgc
accgagtattcagcgcgcatggaagcgctcaaagcgctacaagaaaaagtcaaaaccgat
ggcaagctcaaaccttggttagccaagcatggactggactctttgcaaggtctgtggagc
cgcttgcacattgagcaaggttgggaaaacgctctcgaagcggccttgcgtgagcgtctt
ggcgctttagaagtaagccgtctcgacatggtgcgcggctttgccggcaccgacggacgc
gatgcgccaccggcgaaactggctttttacgccgcaccgcaagccgcagcccctgcgcgc
acaaatagcgcgctcaatctcaaacccttggcggatttgcttcgcctcaatgatgcaggt
ttggccgcactactgggcgactggctacacggctgctataccgccgaaaaacttgacgat
gccttggctgcacgcgaacgcctgcaaactggcgaggtggtctacgtcatgagcggccat
gcagtcaccgcccatagcgtgagtttttacgcccaagactctgagcaatctggcctttta
gcacgcgctcaagaaatcgaaaacctagaaaaacagctgcgcgcccagacgctaattagt
gatgaagcacgcaacgcctcggctcgcgctgaatcggtttatgccgatgcttctcagcgt
ctagcactggcccgccgcgaagccgcagaatatcaaagccgtgcctatgagttgcaagtc
gaattactgcgcctgagtcaactggccgaacaaacccgtgcgcgcagcgagcaaattcag
tcggatatgacggagacgggtgatcaattagagcaactgcaagagcgcaaagctacagca
gaagggcgctttgacgagctcgatatgcagctagcggacacccaagagcgccacgctcag
ctcgacgacaaagtgatccaaaccgagcgcaagctgaccgagtcacgcgaacaacaacgc
tcattagaacgccaattgcaagaagcccagttcgcgctgcgcagccttgccgcacggcgc
caagaattggccaggtcgattgacattgccgcccaacaagccggcaccatagccgctgaa
gagcagcgcgcgagtgaagaactttcgcgcctgagtgatgcagcggccaaggccggcttg
caatccgcactcgacatcaagctagaacgtgaaaccgatatggccgccaagcgcagtcag
tacgatgatttaacaaccaagctacgcgccagcgatgagcggcgtttgcagctagagcgc
gaactcgacccactgcgccagcgcatcaccgagttccaattaaaagagcaagccgcacgt
ttgggttttgagcaatacgagcagttgctgcaagaggcacaggccgatttacccgccata
gagttatcgattcaaaacgggaatgttcggctgactggcttgcaaagtgaaatagaccgt
atcaaccgcgagattcaagcgctgggtgctgtcaatttggcagcgctcgacgagctcagt
tcagcccgcgagcgcaagcagtttcttgacgcgcaatcggctgacttgaacgaagccatg
aacaccttagaagatgcgattaaaaaaatcgacatggaaactcgagagttgctatccgcc
acctttgccagcgtcaacgagcattttggcaaaatgtttccagagctttttggcggcggt
aacgcacgcttgatgatgactggcgaggaaattctagacgccggtgtgcaagtcatggcc
cagccgccgggtaagaaaaaccagacgattcacctgctgtctggtggtgaaaaagccctg
actgcaattgccttggtgtttgcaatttttcagctcaatcccgcgccattttgtttgctc
gatgaggttgatgcgccgctagacgacgctaatactgagcgttatgccaaactggtggca
agcatgagcaaatcgacccaatttttatttatcagccacaataaaatcgctatggagatg
gccgaacaactcataggtgtgaccatgcaagagcaaggtgtctctagaattgtcgcagtt
gatatggaggccgccctaggctttgttgagtctccggcataa
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