KEGG   Polaromonas vacuolata: HC248_01800
Entry
HC248_01800       CDS       T06542                                 
Symbol
alkB
Name
(GenBank) Alpha-ketoglutarate-dependent dioxygenase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
pvac  Polaromonas vacuolata
Brite
KEGG Orthology (KO) [BR:pvac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvac03400]
    HC248_01800 (alkB)
Enzymes [BR:pvac01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     HC248_01800 (alkB)
DNA repair and recombination proteins [BR:pvac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    HC248_01800 (alkB)
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2 2OG-FeII_Oxy
Other DBs
NCBI-ProteinID: QJC56494
UniProt: A0A6H2HA74
LinkDB
Position
complement(1957549..1958241)
AA seq 230 aa
MRSSFNLDLFGDMPEPGESFSPIAPGAALLRGFARAQAAQLLANIEDLIKHAPLRHLVTP
GGYPMSVAMTNCGSFGWGSDQHGYRYTAQDPISGLAWPAMPEIFLTLATAAALAAGFPHF
APDACLINEYLPAARMSLHQDRNERHMTSPIVSVSLGLPAVFLFGGLSRSDKPQRLLLSH
GDVVVWGGPSRLAFHGVAPLADGWHGLLGSRRINLTFRHAGEKLASSGFD
NT seq 693 nt   +upstreamnt  +downstreamnt
atgcgcagtagttttaatcttgatctttttggcgatatgcccgaacccggtgaatcgttt
agccccatcgcgcctggtgctgccttgctgcgcggttttgcacgtgcgcaagcagcgcaa
cttttagccaatattgaagaccttataaaacacgcgccgctacgccatttggtcacgccg
ggcggctatccgatgtcagtggccatgactaattgcggcagttttggttgggggtctgat
caacacggttaccgctatacagcacaagacccaatcagcggcttggcttggccggctatg
ccagaaatctttttaactttggccacggccgcagcactcgccgctggttttcctcacttc
gcgcctgacgcctgtttgattaatgaatatctgccagcagcgcgcatgtcgctacaccaa
gaccgcaatgaacggcatatgacttctcccatcgtgtcggtttcgttgggactgccggcg
gtttttttatttggtggattgagtcgatctgataagccgcagcgcttgttactttcgcat
ggcgatgtagtggtttggggcggcccctcaagactggcctttcatggcgtcgccccactt
gcagacggctggcacggcctgctcgggtcacgccgtatcaacctgacttttcgccacgct
ggggaaaagctggcgagttctggctttgattga

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