Polaromonas vacuolata: HC248_02019
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Entry
HC248_02019 CDS
T06542
Symbol
pilY1_4
Name
(GenBank) Type IV pilus biogenesis factor PilY1
KO
K02674
type IV pilus assembly protein PilY1
Organism
pvac
Polaromonas vacuolata
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvac02044
]
HC248_02019 (pilY1_4)
02035 Bacterial motility proteins [BR:
pvac02035
]
HC248_02019 (pilY1_4)
Secretion system [BR:
pvac02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
HC248_02019 (pilY1_4)
Bacterial motility proteins [BR:
pvac02035
]
Pilus system
Pilus assembly proteins
HC248_02019 (pilY1_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
QJC56709
UniProt:
A0A6H2HA12
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All DBs
Position
2174127..2177558
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AA seq
1143 aa
AA seq
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MLRIPLQAAGTTVAPNLMFTLDDSGSMGWECLPDSICVGSFQVGVMPDMTANWKHGVATA
DSQSVFNMRVRSPAINLQYYNPNVRYQPWMKKDGSRWPATLATQARVFPEIANDTSVINL
ATLQSFDRRWCISESDCGASSTQSIYLAQYYDLTSGNGTAANNFTLVQITAAGTYPSVNT
PKHAARNDCAGISCTGAEELQNFSNWYSYHRTRMRVAIAGTSEAFYAIPATFRVGYGRIN
NSAVGNIDGQTTSTVEQGVRPFSLNEGGSKNAFYDWLNQQIPRYGGTPLRRAMDNVGQYF
SYTDSRGPWGDQPGTTSDTPAQSCRRSFHVLMTDGMWNSDAAPTEAAKANVDNSLGPVIT
GVNNQRYQYSPARPYQDEFSNTLADVAMYYWVNDLNPGLENAVRPTSTDPAFWQHLVTYT
IGFGVSGRLNPDTALPGLTAGSQTWPEPGENRIANIDDLWHAAVNSRGRFLNASNSTQYA
EALKNIVDEIRSINGSESGVAVSAKAISATSRSRKYVPTYSSAMWSGDVEATALSISDGN
QSAIWRASEHIPAFASRNIVVLNSAATSVPKSLAFNWDSMTVAMRTQLFGANDNAGRNLV
NYLRGERSLEGNGFRQRASALGDIVNSAPVLVKDQLDGQYDFLPDTDSLRAARDSYRKFL
TAKKLREAQLFVGANDGMLHAFSDSTGAESFAFIPGSLLDKMKRLSESNYIHDYYVDGPV
VESDVYDSGANKWRNLVVAGLGAGAKAIFAINVPVVASWATGASPPTPYSASTSAPSAND
VMWEINTASTGFAELGYQLAAPEHGVMRDGTWVVIVGNGYESASHKAQLFIINAITGVLI
KVIDTGRGSNASRNGLGGVRLVRNIQKQIVAAYAGDQLGNLWKFDLSSSTRDDWNVAFGT
TGADRNPLYTTASPEPISAAPTYVLHPSGGVMVLFGSGKLFETTDGTDTGARALYGVWDN
VAIGATSIQSADRVTEASSIVNQSLSNTALSDTNGVFYGLMVTPVDYATKRGWRLPLSIA
PGQRLVDDPEVSIGRVMMQTVTPVNSISCQNNYMRRHAFVLDPFMNAIVKPTFDTNADHF
INATDSLTAVSIELNINGPATVVHMLGTSESGLVGSGVGSATSQKFQGNSRSAKRDWRQL
NQP
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgctcagaattcctttgcaagccgcaggcacaactgtggcgcctaacctgatgttcact
ttggatgactccggttctatgggttgggaatgtctgccggattcaatttgtgtaggttca
ttccaagtaggcgtcatgccagacatgacggccaattggaaacatggggttgccacggca
gacagccaatcagtttttaatatgcgtgtgcgctcaccagcgatcaatttgcagtactac
aaccccaacgtccgttatcaaccctggatgaaaaaagacggttcgcgctggccagccacg
cttgccacgcaggcccgagtttttccagaaatcgccaatgacaccagcgtcataaacctt
gccaccttgcagtcattcgaccgcaggtggtgcatttctgagagtgattgcggcgccagt
tcaacacaaagtatttacttggcacagtattacgatttaaccagtggcaacggtactgct
gccaataacttcacgctggtacaaatcactgcggctggcacctacccgtctgtcaatacg
ccaaagcacgctgcgcgtaacgactgcgctggaattagctgtactggggctgaagagttg
caaaatttctctaattggtacagctatcaccgcaccagaatgcgggtcgcaatagccggg
acttcagaggctttttacgctatacccgccacatttagagtgggttatggccgcatcaat
aatagcgctgttgggaatattgacggacaaaccacctccactgttgaacaaggcgtcaga
ccttttagtctgaatgagggtggctctaaaaatgccttttatgattggctcaaccaacaa
attccacgctatggcggcacgccgctaaggcgcgcaatggacaacgtaggtcagtatttt
tcatacactgactccagaggcccatggggtgaccaaccaggcactacaagcgacacccca
gctcaatcttgtcgccgatcgtttcacgtattaatgacagacggtatgtggaacagtgat
gcagcgccaaccgaggcggcaaaagccaatgttgacaacagcttagggccggttattacg
ggcgtgaacaatcaacgctatcaatacagtccagctagaccctatcaagatgaatttagc
aataccttggcagatgtggcaatgtattactgggttaacgacttaaaccccggacttgaa
aacgcggtacgcccaaccagcactgacccagctttctggcaacatttggtgacctacacc
ataggctttggcgtgagtggaagactcaaccctgacacagctttaccagggctgacggca
ggtagtcaaacctggccagaaccgggcgagaacaggattgcaaacattgacgatctctgg
catgccgcagtcaacagccggggacgttttctcaacgccagcaactcaacacaatatgcc
gaggcactgaaaaatatcgttgacgaaattagatcaattaatggcagtgaatcgggcgta
gcggtttctgcaaaagctatttcagcaacctctaggtcgcgtaaatatgtgccaacttat
agttctgcgatgtggagtggcgatgtcgaagccaccgctttatcaatcagcgatggcaac
caaagtgcaatttggcgtgcatctgagcatattcctgcctttgccagtcgcaacatagtc
gtcctcaactccgcagcgaccagcgtgcctaaaagcctggcttttaactgggatagcatg
accgtcgcaatgagaactcagctgtttggcgctaacgataacgcaggcagaaatttagtg
aactacttgcgcggtgagcgcagcttagaaggcaacggctttcgccaacgcgcatcggct
ctaggcgatatcgtcaactcagccccggtgttggttaaagaccagcttgatgggcaatat
gattttttacccgacacagattcgctcagagcggcacgagattcttaccgcaaattttta
accgcgaaaaaattgcgtgaagcacaactcttcgtaggcgccaacgatggcatgctgcac
gcctttagcgacagcacaggcgcagagtcctttgcttttattcccggctcattactcgac
aaaatgaaacgactttcggaatcaaactacatccacgactattatgtcgacggcccagtc
gttgaaagcgatgtttacgacagcggtgcaaacaaatggcgcaacctcgtcgttgcaggt
cttggtgcgggcgcaaaagcaatatttgctattaatgttccggtggtagcttcttgggca
actggcgccagtcctccaacaccatacagcgccagcacttcagcgccaagcgcaaacgat
gtcatgtgggaaatcaacaccgcaagcaccggatttgcagagctaggctaccaactggca
gcgcctgaacacggtgtgatgcgtgacggcacatgggtagtcatcgtcggcaatggctac
gaaagtgcgagtcacaaagcccagctttttatcatcaatgccatcaccggcgtattaatc
aaagtcatagacaccgggcgaggcagcaatgcttcacgtaacggtctgggcggcgtcaga
ctggtgcgcaatattcaaaaacaaattgtggccgcttatgccggtgaccaattgggcaat
ttatggaagtttgatctgtcgtccagcacgcgagatgactggaatgtcgctttcggaact
accggcgcagaccgcaatccactctacacaacggcgagtcctgagccgattagcgccgca
ccgacttatgtgctccatccctctggcggcgtgatggtgttgtttggcagcggcaagctt
tttgagacgacggatggcactgacacaggtgcgcgcgcgctttatggcgtctgggacaat
gttgctatcggtgcaacatcgattcagtcagcagatcgcgtcacagaggccagcagcatt
gtcaatcaaagcttatccaacacggcattaagcgatacgaacggtgtgttttacggctta
atggtcacgcctgtggactatgcgaccaagcgtggctggcgcctacctttgagcattgcg
cccggtcagcgcttggttgacgatcctgaagtcagcataggccgggtcatgatgcagacc
gtcacaccggttaacagcatcagttgtcaaaacaactatatgcgccgccacgcttttgta
ctcgacccgtttatgaacgctattgttaaaccgacgtttgataccaatgcggaccacttt
atcaatgccacagacagcctgacggcggtgagcatagagctcaatataaacggcccagct
actgtcgtgcatatgctgggaacatcagaatcaggactggtcggtagtggcgtcggctct
gctacaagccaaaagtttcagggcaatagccgcagtgcaaaacgcgattggcgccagctc
aatcaaccttaa
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integrated database retrieval system
