Polaromonas vacuolata: HC248_02663
Help
Entry
HC248_02663 CDS
T06542
Symbol
rpfC_1
Name
(GenBank) Sensory/regulatory protein RpfC
Organism
pvac
Polaromonas vacuolata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
CHASE3
HATPase_c
GAF_2
HisKA
GAF
GAF_3
DUF5645
RNase_Y_N
DUF917
Motif
Other DBs
NCBI-ProteinID:
QJC57339
UniProt:
A0A6H2HBT8
LinkDB
All DBs
Position
2882026..2885502
Genome browser
AA seq
1158 aa
AA seq
DB search
MTGQTSIDQKKFHHILTRNISLPLALGTLSGILFLGLTMFLISTLNWVEHTQKVMSNGNE
VGRLSSEMEASMRGFLISGDESFLQPYNVARARSSSQILELTELVNDNPAQLEHIRHVAA
LQLQWNEYAQDIIAKRRQNLPYLELVASKTGKILSDEIRNELSLFDDAEERLLIARNQSA
KSTSLWIVLGYLVFSLGISALLALMGRRELVKLSVAYGTALDQQDKDARVLEQLAWLRDG
QSHLAEQMIGQKTLMLLGETVLDFSAQYLGIAVAALYVRHENGDLRRVASYGFSLNEKNS
AQSFYTNDGLVGQAGRSCNVLQLDDLPENYLRVGSGLGYGALRHVLLIPLVHEGEVKGVA
ELGFLRPLVARDLEFVKLIAGNVGTAIHGAQYRDQRQALLAQAQQLNEELQVQQEELRTA
NEELEEQSRTLRESQINLEKQKNELENTNHQLAHQTMALDQRNSDLTEVQTALEQRAIEL
ISASRYKSEFLANMSHELRTPLNSSLILAKLLADNSKGNLDAEQIKFAQSIYSAGNDLLN
LINDILDISKVEAGKLELTPENIRISKLLDSLKDTFEPLAGQKQLKFVLNSHVDAPSVLV
SDRQRVEQILKNLLSNAIKFTESGEISLTVSALDDGQIAFAVCDSGIGIPAHQQQIIFEA
FQQADGTTSRRYGGTGLGLSISRDLAALLGGKISVQSSQGQGSVFTLQLPAKWHEPDQDK
PDSSAPDTPVVHAAPAVKATNLASPKVLPDLLPGVIDDRQQPLGSRVVLIIEDDKAFAQI
LFDLAHELNYSCLVSHSAEDGYKLASQFVPQAILLDMGLPDDSGLSVLQRLKNNPSLRHI
PVHVVSAQDQSAAALQMGAIGYAVKPASREQLKQVFKKLEDKLTQKVKHVLLVEDDERQR
DSVMHLIGDGDVQITAVETGEEALSLLKGIVFDCMIIDLKLPDIQGSELLRRMSSEDILS
FPPVIVYTGRNLSRAEEAELLKYSRSIIIKGARSPERLLDEVTLFLHTVESDLSYEHQSM
LKTARSRDRVFDGRKVLLVDDDMRNIFALTSALEQKGIAVEIGRNGFEAISKLDEVSDID
LVLMDIMMPGIDGLETTRRIRQNPRFKKLPIIAVTAKAMKDDQQQCLKAGANDYLAKPID
LDRLFSLLRVWMPHVERI
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgactggccagacctcaatcgatcagaaaaagtttcaccacatactcacgcgcaacatt
agtttgccgctggctttgggcacactcagcggaatactgtttctcggtctgactatgttt
ttgatctctactttgaactgggtggagcacacccagaaagtcatgagtaacggcaatgaa
gtgggtaggttgagctctgagatggaagcgagcatgcgcggtttcttgatctccggcgat
gagtcttttttacagccctacaacgttgcgcgagcgcgcagcagcagtcaaatcttagaa
ttaaccgaactggtgaatgacaatccagctcagcttgaacacatcagacatgtcgccgct
ctgcaactacagtggaacgaatacgctcaagacatcatcgccaagcgccgccaaaatctg
ccttaccttgaactggtggcgagcaaaaccggcaagattttgagcgatgaaattcgcaac
gaactgtccttatttgatgacgctgaagagcgcctactcatagcgcgtaatcaaagcgca
aaaagcacctcgctatggattgtgctgggttatcttgtgttttctttgggtatcagcgca
ctgctggcattaatgggtaggcgtgagctggtcaaactctctgtggcctatggcacagcg
cttgatcagcaagacaaagacgcccgcgttctagaacaactggcctggctgcgcgatggc
caatcgcacttggctgagcaaatgattggccaaaaaacgctaatgctactgggcgagacg
gtgctggacttcagtgcgcaatatttaggcatcgcagtcgctgcgctatatgtcaggcat
gaaaacggcgacttacggcgcgtcgcgtcttacggctttagtctgaatgagaaaaactcg
gcacaaagcttttacaccaacgatggtttggtcggccaagccggacgcagttgcaacgtg
ctgcaactggacgatttgccagagaactatctcagagttggctccggcctaggttatggc
gcactgcgtcacgtacttctcattcctttggttcacgagggcgaagtcaaaggcgtcgcc
gaacttggctttttacgtccactggtggcgcgcgaccttgaatttgtcaaactcatcgcc
ggcaacgtaggcactgcgatccatggtgcgcaataccgcgatcaaaggcaagcactgctg
gcccaagcgcagcagctcaatgaagaactgcaagtgcagcaagaagaattgcgcacagcc
aacgaggagcttgaggagcagtcgcgaacgctcagagagtcccagatcaacttagaaaag
caaaaaaacgagctcgaaaataccaaccatcagttagcccatcaaaccatggcgctggat
caaagaaactctgacctgaccgaagtgcaaaccgcgctggagcagcgagccatagagcta
atcagtgcaagccgctacaagtctgagtttttggccaatatgtcgcatgaactgcgtact
ccgcttaacagctcactgatactggccaagctgctggctgacaattctaagggaaacctc
gatgcggagcagatcaagtttgcgcagtctatctattcagcgggaaatgacttgctcaac
ctgattaacgacatcttagatatctccaaggtcgaagctggaaagcttgaactgacgcct
gaaaacatacgcatatccaagctactcgattcactgaaagacactttcgagcccttggcc
ggtcaaaagcaacttaagtttgtactgaactcccatgtcgatgcgcctagtgtgctggtc
agcgaccgccagcgggtggagcaaattctcaagaatttgctctctaacgccatcaaattt
accgagtcgggcgaaatcagcctaaccgtctcagcgcttgacgacggccagatagccttt
gcagtgtgcgactccggcataggcataccggcccaccaacaacaaataatttttgaagcc
tttcagcaagccgacggcacgaccagcaggcgctatggcggcactggtctgggcttgtca
atatcgcgtgacttagccgcattactaggcggcaaaatcagcgtccaaagcagtcaaggc
caaggcagcgtgttcaccttgcaacttcctgccaagtggcatgagcctgaccaagacaag
ccagattcatcggcaccagacaccccagttgtccacgctgcgccggccgtgaaagcgacc
aacctggcgagcccaaaagtcctccccgacctgctaccaggggtgatcgacgacaggcag
caacccctaggcagtcgagtggtgttaatcattgaggacgacaaagcttttgcccaaatt
cttttcgacttagcccatgagctgaattacagctgcttggtctcccacagtgccgaagat
ggctataagctcgccagtcagtttgtaccgcaggcgattttgctcgacatgggcttgcct
gacgactccggcctgtcagtgctgcagcgactcaaaaataatccatcactgcggcacatt
cctgtgcatgtggtctccgcgcaggaccaaagcgcagcagctctgcaaatgggcgcgatt
ggttatgccgtcaaaccagccagccgagagcagctcaagcaagtgttcaagaaacttgaa
gacaagctgacgcaaaaagtcaaacatgtgttgttggtagaggacgatgaaagacagcgc
gacagcgtcatgcacctgataggcgacggcgatgtgcaaatcactgcagtggaaaccggc
gaagaggcgctatccctgctgaaaggcatagtttttgactgcatgattattgacctcaag
ctgccagatattcaaggcagcgaactactcaggcgcatgtctagcgaagacatactgtct
ttcccgcctgtcatcgtctacaccggccgcaacctaagccgagccgaagaagctgagctg
ttgaaatattcacgctccatcatcatcaaaggagcacgctcacccgagcgactgcttgac
gaggtcacgttatttctgcacacagtggagtccgacctgagctacgagcaccaaagcatg
ctgaaaaccgctcgcagtcgagaccgagtttttgacggtcgcaaagttttactggttgat
gacgatatgcgtaatatttttgccttgaccagcgcgctggagcaaaaaggcattgctgtt
gaaatcggccgcaatggctttgaagcaattagtaaactagacgaagtcagcgacatagac
ctggtgctaatggacatcatgatgcctggcattgacggcttagagacgacgcggcgcata
cgccaaaacccgcgctttaaaaagctacccatcatcgccgttacggcgaaagccatgaaa
gacgatcaacagcaatgtcttaaagccggcgccaacgactacttagccaaaccgatagac
ctcgatagactgttttcactgctacgcgtctggatgccgcacgtggaacgcatctaa
DBGET
integrated database retrieval system
