Polaromonas vacuolata: HC248_02785
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Entry
HC248_02785 CDS
T06542
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pvac
Polaromonas vacuolata
Pathway
pvac02024
Quorum sensing
pvac03060
Protein export
pvac03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HC248_02785 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HC248_02785 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HC248_02785 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvac02044
]
HC248_02785 (ffh)
Enzymes [BR:
pvac01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HC248_02785 (ffh)
Secretion system [BR:
pvac02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HC248_02785 (ffh)
Eukaryotic Sec-SRP protein
HC248_02785 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
APS_kinase
cobW
AAA_30
AAA_16
AAA_31
AAA_33
nSTAND3
ResIII
Thymidylate_kin
AAA_22
AAA_24
AAA_14
6PF2K
T2SSE
GldN
ArsA_ATPase
TsaE
GTP_EFTU
YqeC
AAA_18
SAS4
AAA_19
KTI12
Motif
Other DBs
NCBI-ProteinID:
QJC57456
UniProt:
A0A6H2HDB5
LinkDB
All DBs
Position
complement(3012642..3014000)
Genome browser
AA seq
452 aa
AA seq
DB search
MASALTDKLTRLVKEMRGQARITETNVQDMLREVRMALLEADVALPVVRDFINRVKEKAL
GQEVMGSLSPGQALVSIVSRELAATMGEGVSDINLAAQPPAVILMAGLQGAGKTTTTAKL
AKYLIEKRKKKVLTVSGDVYRPAAIEQLKTVTAQAGAEWFPSSPDQKPVDIALAALDYAR
RHFFDVLLVDTAGRLAIDAALMAEITQLHAVLKPVETLFVVDAMQGQDAINTAKAFKEAL
PLTGIILTKTDGDSRGGAALSVRQITGAPIKFSGTSEKLDGLEVFDAERHAGRILGMGDI
LSLVEQVTAGVDMAAAQKLAAKMKSGDGFDLNDFLSQIQQMKNMGGLSSLLDKLPAQMAA
KAGQVDMDKAEKDIKRKEGIIQSMTPLERRKPELIKATRKRRIASGSGVHVQEVNRLLNE
FEQMQGMMKKLKGGGMMKMMKRMGGMKGMPKF
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagcccttaccgacaaactcacacgcctagtcaaggaaatgcgcggccaagcc
cgcattaccgaaaccaatgtccaagatatgctgcgcgaagttcgcatggcattgttagag
gccgacgtcgcactgcccgtggtgcgcgactttattaaccgcgttaaagaaaaagccctc
ggccaagaagtcatgggctcgctctcacccggccaagccttggtctccatcgtcagccgt
gaactcgccgccaccatgggcgagggcgttagtgacatcaatctcgccgcccaaccaccg
gccgtgattttgatggccggcctacaaggcgcaggtaaaaccaccactaccgccaagctg
gccaaatacctgattgaaaagcgcaagaaaaaagtgctgaccgtctcaggcgacgtttac
cgcccggccgctatcgagcagcttaaaaccgtcaccgctcaagccggtgccgagtggttc
ccgagtagcccggatcaaaaaccggtggatattgcattagctgccttggactatgcgcgc
cggcatttctttgatgtgctgctggtcgataccgcaggccgcctagccattgacgccgct
ttgatggctgagattacccagctgcatgcggtgctaaaaccggtagagacactttttgta
gtcgacgccatgcagggtcaagatgcgatcaataccgccaaggcgtttaaagaagccttg
ccgttaaccggcattattctgaccaaaaccgatggcgattcgcgcggtggtgcagccctt
agcgtgcgccaaatcaccggcgcgccaattaagttctcgggcactagcgaaaagctagac
ggccttgaagtctttgatgccgagcgtcatgccggccgtattctcggcatgggcgacatt
ttgtcgctggtcgaacaagtcaccgccggtgttgacatggccgcggcgcaaaagctggcg
gccaagatgaagtctggcgacggttttgatctgaatgattttttaagccaaattcagcag
atgaaaaacatgggcggcttgtccagcctgctggataaattgccggcgcagatggcagct
aaagccggtcaggtcgacatggataaagctgaaaaagatatcaagcgcaaagaaggaatt
atccaaagcatgacgccactagagcgccgcaagcccgagctaatcaaagccacgcgcaag
cgccgcatcgcctccggttctggcgtgcatgtgcaagaagtcaaccgcctgctcaacgag
tttgagcaaatgcaaggcatgatgaaaaagctcaagggcggcggcatgatgaagatgatg
aagcgcatgggcggcatgaagggcatgcctaagttttaa
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