Polaromonas vacuolata: HC248_02818
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Entry
HC248_02818 CDS
T06542
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pvac
Polaromonas vacuolata
Pathway
pvac00470
D-Amino acid metabolism
pvac00550
Peptidoglycan biosynthesis
pvac01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HC248_02818 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HC248_02818 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pvac01011
]
HC248_02818 (murD)
Enzymes [BR:
pvac01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HC248_02818 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pvac01011
]
Precursor biosynthesis
Amino acid ligase
HC248_02818 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
AlaDh_PNT_C
F420_oxidored
2-Hacid_dh_C
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QJC57489
UniProt:
A0A6H2HC87
LinkDB
All DBs
Position
complement(3049675..3051579)
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AA seq
634 aa
AA seq
DB search
MKHLAGQNILVLGLGISGLALARWCVRCGAQVTVADTRAQPPQLAALKAELPAVQFVAGA
FDANLFGSAVFDLVLKSPGLSPTAIAGVIDAAQARGTACGNELSLFAQALADLKQTQGYA
PKVIAITGTNGKTTVTSLTGQLVARAGKSVAVAGNIGPSLLDTLTQKLAVQALRLAEQAA
EQEIERALIDEQQQDAQAQAASLGSHAAQSGVVSSASVQVEIVTDVAAADSQASSVVKEA
QATETQAAPEKDSASEESSDEIDDEKIDAVVDELADDCADQALDETTDDEITPVVLQVPE
AEPLVSQFLPDVWVLELSSFQLDGVRNFEPTTAAVLNISQDHLDWHGSMQAYCAAKANVY
GPNSLMLLNRNDERVMRALPALVKGKQLRSYFTFGSDVPQRPGDYGIETVGGMAWLVRAA
EADETIKRRKIADEVVLYVQRLMPLDALRIQGRHNATNALAALGLAGAAGCGLAAMLHGL
RDYRGEPHRMQSVAVLADVEYFDDSKGTNVGATVAALAGLGATRQLVLILGGEGKGQDFS
PLLEPITRYARAVVLIGRDAGLIRSALGGTQVRLLDAENMQAAVQIAAEQAQSGDAVLLS
PACASFDMFDNYEHRAHVFCDAVQSMAADLGVLL
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatctggctggtcaaaacatcttggtgctggggctgggtatttccggcctcgcg
ctggcacgctggtgtgtgcgctgcggcgcgcaggtcacagttgccgatacgcgggcgcag
ccaccgcaactggcagcactcaaggccgagttgcccgccgttcagtttgtagcgggcgcg
tttgatgcgaatttattcggctcagcggtgtttgatttggtgcttaaaagccccggccta
tccccgactgcgatagctggcgtgatagacgccgcacaagcgcgcggcacggcttgcggc
aatgagttgagtctgtttgcacaagcgctggccgacctcaaacagacccaaggctatgcg
ccaaaagtcattgcgattacgggtaccaacggtaaaaccactgtcacatcgctgaccggt
cagttagtcgcccgagctggaaaaagcgtagccgtggccggcaatattggtccttcgttg
ctcgacacattgacgcaaaaattagccgtacaagcgttgcgattggctgagcaggccgcc
gagcaagaaattgagcgggctttaatcgacgagcagcaacaagatgcacaagcacaagcg
gcatcactaggctcgcacgcagcgcagagcggtgttgtctccagtgcaagtgtccaagtg
gaaatagttaccgacgtagcagctgctgacagccaagcaagttctgttgtgaaagaggct
caagcgacagaaacacaggctgctcctgaaaaagattcagccagcgaagaatcaagcgac
gaaattgatgacgaaaaaattgacgcggtagtcgatgagttagccgacgattgtgctgac
caagcactggatgaaactaccgacgatgaaataacaccggtggttttgcaagtccccgag
gctgagccgctggtcagtcagttcttgccagatgtctgggtgctagaactttctagtttt
cagctcgatggcgtgcgtaatttcgagcccacaacagctgccgttctcaatatcagccaa
gatcacctcgactggcatggcagcatgcaggcttactgcgccgccaaagccaatgtctac
ggacccaacagcctgatgctgcttaaccgcaacgacgagcgtgtcatgcgcgctttaccg
gcactcgtcaaaggcaagcagttgcgcagttatttcaccttcggcagcgacgtgccgcag
cgccccggtgactacggcattgaaacggtaggcggtatggcgtggctggtgcgcgcagca
gaagccgacgagacgattaagcggcgcaagattgccgatgaagtagtgctttacgtgcag
cgcttaatgccgctggacgcactgcgcattcaaggccgtcataacgccaccaatgcacta
gccgcactaggtctggccggtgctgccggttgcggcttggccgctatgctgcacggtttg
cgcgattaccgcggcgagccgcatcgcatgcagtcagtcgctgtgctggctgatgtcgaa
tattttgacgacagcaagggcaccaacgtaggcgctacggttgcggctttggccgggctg
ggcgcgacccgtcaattggttttgatcttgggcggcgaaggcaagggtcaagacttctcg
ccattgttagagccgatcacacgttatgcccgcgccgtggtgttaattggccgtgatgcc
ggcctgattcgctctgcactaggcggcacacaagtgcgcttgttggacgctgaaaacatg
caagcagcggtgcaaatagccgccgagcaagcccaaagcggcgacgccgtgttgctgtct
ccggcttgcgccagctttgacatgtttgacaactacgagcaccgcgcccatgtgttttgc
gatgcagtgcagtccatggctgctgacttgggcgtgctgctatga
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