Polaromonas vacuolata: HC248_02937
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Entry
HC248_02937 CDS
T06542
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pvac
Polaromonas vacuolata
Pathway
pvac00300
Lysine biosynthesis
pvac00470
D-Amino acid metabolism
pvac01100
Metabolic pathways
pvac01110
Biosynthesis of secondary metabolites
pvac01120
Microbial metabolism in diverse environments
pvac01230
Biosynthesis of amino acids
Module
pvac_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HC248_02937 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HC248_02937 (lysA)
Enzymes [BR:
pvac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HC248_02937 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QJC57607
UniProt:
A0A6H2HCW7
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All DBs
Position
3184117..3185427
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AA seq
436 aa
AA seq
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MTQTTDHTTPSSLPGQPFIAYQGHALFVEEVSLQALATQYGTPLFVYSKAAMLSALAAYQ
RGFEGRQAQICYAMKANSTLGVLQVFANAGCGFDIVSGGELERVLAAGGDARKVIFSGVG
KTPAEMRQALKAGIGCFNVESEAELDVLSEQALGLHMVAPISIRVNPNVDPKTHPYISTG
LKDNKFGVAHEDALRIYRHAASLKGLKVVGIDCHIGSQITDSRPYLDAMDRMLDLVAAIE
AAGIAIEHIDFGGGLGINYNNDEPPAADALWALLLAKLDERGYGERKIMIEPGRSLIGNA
GVCVTEVLYTKPGEEKNFCIIDAAMNDLPRPSLYQAFHAIVPLNTADRGRTTQTYDVVGP
ICESGDWIGRERALAVAPGDCLAVLSAGAYCMSMASNYNTRGRAAEVLVDGGKVNLIRQR
ESVKDQMRNELQALGG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacacagactaccgatcacacgacgcctagcagcctgcccggccaaccctttatcgcc
tatcaaggccatgccctatttgtcgaggaggtctcgctacaagcgctggcaactcaatac
ggcacgccgctgttcgtctattccaaggccgctatgctgtctgcgttggcagcataccag
cgtggctttgaaggtcggcaagcgcaaatttgctatgccatgaaggccaattccacgtta
ggtgtgctgcaagtatttgccaacgccggctgcggctttgacatcgtctctggcggcgag
cttgaacgcgtgctggccgcaggtggcgatgcgcgcaaggtaattttttctggcgtcgga
aaaacacccgccgagatgcgtcaagcgcttaaagcaggcataggctgctttaacgtcgag
agcgaagctgaactcgacgtgctgtctgagcaagcgctgggcttgcatatggttgcacct
atcagcattcgcgtgaacccaaacgtagaccctaaaacccatccctacatttccactggc
ctaaaagacaataagtttggcgtagcccacgaggacgcactgcgcatttaccgccacgcg
gcgtcgctcaaaggactaaaggtagtcggcattgattgccatatcggctcacaaattact
gactccaggccttatctagacgcgatggatcgcatgcttgacttggtcgctgcgattgag
gcggccggcatagcgattgaacacattgattttggtggtggtctaggcattaactacaac
aatgatgagccgccagcagcggatgcattgtgggcgttgctgcttgccaagctagacgag
cgcggctatggcgagagaaaaatcatgattgagccaggccgctcactcatcggcaatgct
ggcgtttgcgtgaccgaagtgctctacaccaagcccggcgaggagaaaaatttctgcatc
atagacgcagctatgaacgacttgccacggccttctctataccaagcctttcacgccata
gtgcccctgaacaccgctgataggggccgcaccacccagacttacgatgtggttggcccg
atttgcgagagtggtgactggattggtcgcgagcgtgctttagccgtggctcccggtgac
tgcctagcagtgttatcggccggggcctattgcatgagcatggccagcaactacaacaca
cgtggccgcgccgctgaagttttggttgatggcggcaaggttaatttaattcgtcagcgc
gaatcggtgaaggaccagatgcgcaacgagttgcaagcattaggcggctaa
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