Polaromonas vacuolata: HC248_03030
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Entry
HC248_03030 CDS
T06542
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pvac
Polaromonas vacuolata
Pathway
pvac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HC248_03030 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvac03400
]
HC248_03030 (ruvB)
Enzymes [BR:
pvac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HC248_03030 (ruvB)
DNA repair and recombination proteins [BR:
pvac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HC248_03030 (ruvB)
RecFOR pathway proteins
HC248_03030 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
nSTAND3
Mg_chelatase
AAA_14
AAA_16
AAA_22
AAA_3
Rad17
Bac_DnaA
NTPase_1
RNA_helicase
TsaE
AAA_18
Sigma54_activ_2
AAA_17
ABC_tran
AAA_33
DUF815
AAA_28
NB-ARC
AAA_24
NPHP3_N
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
QJC57700
UniProt:
A0A6H2HCZ1
LinkDB
All DBs
Position
complement(3291752..3292813)
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AA seq
353 aa
AA seq
DB search
MSIQTDNFLPGPPPPKRVISAAPASPGEEAIERALRPKLFDDYVGQVKAREQLQIFIGAA
KKRGEALDHVLLFGPPGLGKTTLSHIIAHELGVNMRQTSGPVLEKPKDLAALLTNLEKND
VLFIDEIHRLSPVVEEILYPALEDYQIDIMIGDGPAARSIKLDLQPFTLVGATTRAGMLT
NPLRDRFGIVARLEFYTPEELARIVKRSAGLLNAPMDADGGFEIARRSRGTPRIANRLLR
RVRDYADVKGDGQITLAIANLALAMLDVDPKGFDVMDRKLLEAVIHRFDGGPVGLDNIAA
SIGEERDTIEDVIEPYLIQQGFLQRTPRGRIATLAAYLHLGVTPPNRGNETLS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgagcatacaaaccgataatttcctgcccggcccgccaccacccaaacgcgtcatttcc
gccgcacctgcgtcgcccggcgaggaggcgatagagcgcgccctcaggcccaagttgttt
gacgactatgtgggccaagtcaaagcgcgtgagcagttgcaaattttcataggtgcagcc
aaaaaacgcggtgaagcgcttgaccatgtgctgctgtttgggccacccggtttgggtaaa
accacgctgtctcacatcattgcccacgagttaggcgtgaatatgcgccagaccagcggg
ccggtgttagaaaagcctaaagacttggccgcactgctgaccaatctagaaaaaaacgat
gtgcttttcattgatgaaattcaccgcctaagcccggtcgtcgaagaaattttgtatccc
gcgttagaggactatcaaattgacatcatgattggtgacggcccggctgcgcgcagtatc
aagctagatttacagcccttcacgctagtgggcgcaaccacccgtgccggcatgctgacc
aacccgctgcgcgatcgttttggcatagtcgcccggctggagttctacacccccgaagaa
cttgcccgcatcgtcaaacgcagtgctggcttgctcaatgctccgatggatgcggacggc
ggctttgaaatcgcccgccgctcgcgcggcacaccgcgcatcgccaaccgcttgctgcgc
cgcgtgcgtgactatgcggatgtcaaaggcgacggccaaatcaccttggcgatcgccaat
cttgcactggccatgctggacgttgatcccaaaggttttgatgtgatggaccgcaagttg
ttagaggccgtgattcaccgctttgatggtgggccagtcggtctggataacatcgccgcc
agcataggcgaggagcgcgacacgattgaagacgtgatcgaaccttacttaattcaacaa
ggctttttgcagcgcacgccgcgtgggcggattgccaccttggcggcgtatttgcatttg
ggtgtaacgccgccgaatcgcggcaatgagacgctgtcttaa
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