Polaromonas vacuolata: HC248_03056
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Entry
HC248_03056 CDS
T06542
Symbol
phrA
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pvac
Polaromonas vacuolata
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvac03400
]
HC248_03056 (phrA)
Enzymes [BR:
pvac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HC248_03056 (phrA)
DNA repair and recombination proteins [BR:
pvac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HC248_03056 (phrA)
Prokaryotic type
HC248_03056 (phrA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QJC57726
UniProt:
A0A6H2HE37
LinkDB
All DBs
Position
complement(3323868..3325334)
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AA seq
488 aa
AA seq
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MDKKYLTGLIWFRRDLRASDNAALHHALKSCAHVHCVFVYDRAILDGLPRVDRRVEFIHA
AIAELHQSLQALGAQHAQPGAGLIVLHDQADERVAQLALELGVEAVFTNHDYEPQALARD
AKVQAQLGRQGQAFHSFKDHVIFERAEVLTLASKPYSVFTPYKNAWLKKVDAYYLSPYAI
DAHASALSALPKKYKTKLPSLEALGFEPSNLKDLKIPTGASGGETLLADFLPRMQAYQET
RNFPSVKGPSYLGVHLRFGTVSIRKLVQLAMKEDSEGAAVWLSELIWRDFYAQILSNFPH
AASQAFKPDYDRIEWESGASAKALFAAWCEGRTGYPLVDAAMAQINQTGYMHNRLRMVVA
SFLVKDLGLDWRWGERYFAQHLNDFDLASNNGGWQWAASSGCDAQPYFRIFNPTSQSEKF
DADGKFIRRYLPVLAGLPTKVLHCPWLAGPLELAAADVRLGDNYPLPVVKHDEARALTLT
RYAVVKKT
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaataccttaccggcttgatctggttccggcgcgatttgcgcgccagcgat
aacgcagcacttcaccatgcgcttaagtcttgtgcccacgtgcactgcgtttttgtttat
gaccgtgcgatattggacggcctgccgcgggtggaccgccgggttgagttcattcacgcc
gccatcgctgagttgcaccaaagcctgcaagccttgggcgcgcagcatgcgcagccgggc
gcgggcttgatcgtgctgcatgaccaagccgacgagcgcgtggctcaattggcgcttgag
ttgggcgtagaggcggttttcaccaatcacgactatgagccacaagcgctggcgcgtgac
gctaaagtgcaggcgcaactaggccgtcaaggccaagcctttcatagttttaaagaccac
gtgattttcgagcgcgctgaagtgctcaccttggcgtccaagccatacagcgtattcaca
ccgtataaaaatgcttggcttaaaaaagtcgatgcctactatctctcgccctatgccata
gacgcacatgcttcggccttaagcgccttgccgaaaaaatataaaaccaagttacccagt
cttgaggccttgggctttgagccaagcaatctcaaagatttgaaaatccccaccggtgca
tctggcggcgagactttgttggcagattttctgccgcgcatgcaggcttatcaagagact
cgcaactttccctcagtcaaggggcctagctacttgggtgtgcatttgcgctttggcaca
gtctcgattcgtaagctggtgcaactggccatgaaggaggacagcgaaggggcggcggtg
tggttgagcgaattaatttggcgtgatttttacgcgcagattttgagtaattttccgcac
gcagctagccaagcctttaaacctgattacgaccgtattgagtgggagagtggggcgtct
gccaaggccttgtttgccgcttggtgcgaaggccgtactggctatccgctggtagatgcg
gcgatggcacaaatcaaccagactggctatatgcataaccgcctgcgcatggtggtggcg
agttttttagtgaaagatttaggccttgattggcgctggggtgagcgttattttgcccag
catcttaacgattttgatttggcgtcaaacaatggtggctggcagtgggcggccagcagt
ggctgtgatgcgcagccgtatttcagaatttttaatcccaccagtcagagcgaaaaattc
gacgcagatggcaaatttattcgccgctatttacccgtgctggccggactgcccaccaag
gttttgcactgcccgtggctggctgggccgctagagttggcggcggcagatgttcgctta
ggtgacaactatcccctgccggtggtaaagcatgacgaggcgagagcgttgactttgacg
cgctatgcagtggtcaaaaagacctag
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