Polaromonas vacuolata: HC248_03139
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Entry
HC248_03139 CDS
T06542
Symbol
rfbB_2
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pvac
Polaromonas vacuolata
Pathway
pvac00521
Streptomycin biosynthesis
pvac00523
Polyketide sugar unit biosynthesis
pvac00525
Acarbose and validamycin biosynthesis
pvac00541
Biosynthesis of various nucleotide sugars
pvac01100
Metabolic pathways
pvac01110
Biosynthesis of secondary metabolites
pvac01250
Biosynthesis of nucleotide sugars
Module
pvac_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HC248_03139 (rfbB_2)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HC248_03139 (rfbB_2)
01055 Biosynthesis of vancomycin group antibiotics
HC248_03139 (rfbB_2)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HC248_03139 (rfbB_2)
00525 Acarbose and validamycin biosynthesis
HC248_03139 (rfbB_2)
Enzymes [BR:
pvac01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HC248_03139 (rfbB_2)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
QJC57808
UniProt:
A0A6H2HD60
LinkDB
All DBs
Position
complement(3414791..3415867)
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AA seq
358 aa
AA seq
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MILVTGGAGFIGANFILDWLSKSDEPVINLDTLSYAGNLESLASLHGDARHIFIRGDIAD
TALIASLLAEHQPRAIINFAAESHVDRSIHGPEDFIQTNIVGTFRLLEAVLGYWRAMADA
DKSKFRLLHVSTDEVYGSLDPGDAAFTETHQYQPNSPYSASKAASDHLVRAYHHTYGLPV
LTTHCSNNYGPLHFPEKLIPLVIVNALADKPLPVYGDGRQVRDWLYVKDHCSALRRVLQN
GRLGEVYNIGGGNEKLNIEIVKTLCRLLDELRPRADGKSYALQISYVTDRPGHDKRYAIN
ASKIEHELGWRPEETFDTGIRKTVVWYLANPDWLANVQSGAYREWRGKQSAAPEKLAL
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgattttagttaccggcggcgcaggctttataggcgctaatttcatcctcgactggctc
tctaaatcagacgagccagtgataaaccttgacacgcttagctatgcgggcaacttagag
agtctggcctctcttcatggcgatgcgcggcatatttttattcggggcgacattgctgat
acagcgctcatcgctagtttgctggccgaacaccagccgcgtgcaattattaatttcgcg
gctgaatcccatgtggatcgttccatccatggcccagaagactttatacaaaccaatatt
gtcggcacctttcgcttgctcgaagccgtactcggctattggcgagcgatggcggatgcg
gataaatctaaatttcgtttgctgcatgtttctaccgatgaggtctacggctcactcgat
cccggcgatgccgcctttactgaaacccatcagtaccaacccaatagtccctactccgcc
agcaaggctgccagcgatcacttggtgcgagcctatcaccacacctacggcttgccggta
ttaactacccattgcagcaataactacggcccgctgcactttcctgaaaagctaattcct
ttggtcatcgtcaatgctttggctgacaagccgctgccggtttatggcgacggcaggcaa
gtgcgtgattggctgtatgtcaaagaccattgcagcgctctacgccgggtgttgcaaaac
ggtcggctaggtgaggtctacaacattggtggcgggaatgaaaaactaaatatagagata
gttaaaacgctttgtcgcttgctcgacgagttgcgtcccagagcggatggtaaaagttat
gcgctacaaattagctatgtcacggacagacctggtcatgacaagcgctacgccataaat
gccagcaaaattgagcacgagctaggttggcgtccagaggaaacctttgacactggcata
cgtaagaccgtggtttggtatttggctaatcccgattggctcgctaatgtgcaaagtggc
gcttaccgcgagtggcggggcaagcagtctgcagcaccagaaaagcttgccttatga
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