Polaromonas vacuolata: HC248_03262
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Entry
HC248_03262 CDS
T06542
Name
(GenBank) putative signaling protein
Organism
pvac
Polaromonas vacuolata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
dCache_1_like
PAS_8
PAS_3
PAS_4
dCache_1
DUF6428
Motif
Other DBs
NCBI-ProteinID:
QJC57930
UniProt:
A0A6H2HDM2
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All DBs
Position
3538048..3541053
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AA seq
1001 aa
AA seq
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MKLPQRYVPALLAVLTGVVLFAAIGYKLVRERNVAIEVARTQTQNLVGVLEEHARQTLHR
VGNHLSQASETLEEQRVANITDKALLRNKLIAILPADRLIRAFLVLDQKGNVQLSTLELG
EPAPKNLADRDYFFPHIEGSDRELVFGALEKNPADGNWTLPVSRSLTSANGKLNGVLVAL
VEPRYFQSFYDSIDSGEKGLLSLFLTSGWAAVTTPHNAALLNRNWLKSPLFRVYMPKWPT
GTVHEVETIDGVERIYSYRVMNDYPVVLSYGLSMDAVLSGWRRVAWMDGILLLVGLMALT
GASLVLTRHDKRRRATEKILDESQERYRVLIESSPVGIAAHKDGRFVYVNPACIKMLGAT
CEADLLKKPILDFVHPSFHRAVVKQIKKRFIDNGGAIDKLEVKLVCFDGRAIDVEVEGTL
IPFEGSKASQISIIDITDRKRAEESLRVAAIAFEAQEGIIVTDADKIILRVNSAFTRITG
YSANEAIGNTSRLFRSSRHTPEFFDNLLKVITDSGIWQGELWNQRKNGEEYPTRLSITVV
KDIHGQLTHYVATMVDITQDRAAADVIKKLAFYDSLTELPNRRLLMDRLQEAVTSSARHD
RYGALLFLDLDHFKILNDTQGHDAGDALLQQVARRLTSVVREDDTVARLGGDEFVVLLEN
LSVNALDAAEQTQVISNKISLALSQPYTLDEHQHHSTASVGAVQFKGQQQSAANLLKQAD
IAMYAAKTAGRNTYRLFDPKMQACISERAALDADLRLALSEQQLRLYFQKQVSHDGHTVG
AEVLLRWQHPQRGLVLPDQFIPLAEDSGQIVAIGAWLLLEACQQLKLWQSDPQHSTLTLA
VNVSAGQFRQSDFVEQVKHALQTTGAHADHLKLELTESTALDNVDDTISKMNALKTLGVR
FAIDDFGTGQSSLSYLTQLPLDQIKIDQSFVRHIGRRPQDTLIVQTIIGMAHNLGMEVIA
EGVETQAQCDFLVKHDCLLFQGYLFGRPVPLEDFNLNAADK
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaccgcagcgttacgtgccagctttgctagccgtattgacgggtgtagtgctt
ttcgcagcgattggttacaagcttgtacgtgaacgcaatgttgcgatcgaggtcgcacgc
acacagactcaaaatctagtcggagtgcttgaagagcatgcgcgccaaacccttcaccgg
gttggaaaccacttaagccaagccagcgaaacgctagaagaacagcgtgtggccaacatc
accgataaagcattacttcgcaataaattgattgcgattttgccagccgatagattgatt
cgcgcattcttagtactcgatcaaaaaggcaatgtgcaactgtcaacgctagagttaggc
gagccagcgccaaaaaatctagccgaccgcgactactttttcccgcatattgaggggtct
gatcgcgagctggtgtttggtgcgttagagaaaaatccagcggatggcaattggacgcta
ccagtcagtcgcagtctgacctcagccaatggcaagttaaacggggttcttgtcgcattg
gttgaaccgcgctatttccaatctttttacgactcgattgatagcggcgagaagggcttg
ctgtcgttattcctgacctcgggctgggccgcagtgacgaccccgcacaacgccgccttg
ctcaatcgtaactggttgaaatcacccttgtttcgagtttatatgcccaagtggccaacc
ggtaccgtgcatgaagttgaaactattgacggtgtagagcgcatctacagctaccgcgtg
atgaatgattatccggtggtcttgagctacggcctgtcaatggatgctgtactgtctgga
tggcgcagagtcgcttggatggacggcattttgctactcgtcggactgatggctttgaca
ggcgcgagcctggtgctcacgcgtcacgacaaacgtcgccgcgcgactgaaaaaatactg
gacgaaagccaagagcgctaccgcgtcttgatcgaatcgtctccagtcggcatcgccgct
cataaggatggtcgattcgtttatgtgaatccggcctgtatcaagatgttgggagcaacc
tgcgaagccgatttattgaaaaaaccaatactagactttgtacaccccagcttccaccgc
gccgtagtaaaacagattaaaaagcgttttatcgacaatggcggcgcaatcgacaaacta
gaagtcaaacttgtgtgctttgatggccgggcaattgacgtcgaagttgagggaaccttg
attccgtttgaaggcagtaaagcctcgcaaattagcataatcgacatcaccgatcgaaaa
cgcgcagaagaaagtctgcgcgttgcggctatcgcatttgaggcgcaggaaggcatcatc
gtgaccgatgccgacaagatcatccttcgcgtcaacagtgcttttactcgcatcaccggc
tacagcgcgaatgaagcgataggcaatacctcacgcctgtttcgatcttcccgccacaca
ccagaattctttgacaacttattgaaagttatcactgactcaggcatttggcagggcgag
ttgtggaatcagcgtaaaaatggtgaggaatatccgacccgactctcgattactgtcgtg
aaagacattcacggacaactcacccattacgtcgccaccatggtcgacatcacacaagac
cgggcagcggcagatgtgattaaaaaactagccttctatgattcgctgacagagctgccc
aatcgccgcctgctgatggatcgcttacaagaggcggtaaccagcagcgcacgacatgac
cggtatggcgccctgctgtttttggatctggatcatttcaagatactcaacgacacgcaa
gggcacgacgctggcgacgcgctactgcagcaggtcgcacggcgtctgactagcgtggta
cgcgaggacgacaccgtagcccgtttaggcggggacgagtttgtggttttgcttgagaat
ttaagcgtgaacgcgctggacgccgccgaacaaacacaagtcatcagcaacaaaatatca
ctcgccttgagccagccatacacattggacgagcaccaacaccacagtacggccagcgtg
ggcgcggtgcagttcaaaggtcaacaacaatcagcggccaatttactcaagcaagccgac
atagccatgtatgcagccaagaccgccggacgcaacacataccgtttgttcgatccaaaa
atgcaggcctgtattagcgagcgcgccgccctagacgctgacttgcgactagcgctgagc
gagcagcagttgcgcttgtattttcaaaaacaagtcagccacgacggacacactgtgggg
gccgaagtgttgctgcgttggcaacatccgcagcgcggtctagtactgccagaccaattc
attccactggcagaagattctggacagattgtggcgattggtgcttggctgctattagag
gcctgtcagcagttaaagctctggcagagcgatccacagcacagcacattgacgctggcc
gtgaacgttagcgcaggtcagttcaggcagagcgactttgtcgagcaggtaaagcacgcg
ctgcagaccacaggcgcacacgcagaccatctcaaactcgagctaaccgagagcactgcg
ctcgacaacgtcgacgacacgataagcaagatgaatgcactcaaaacgctaggcgtgcgc
tttgctatcgacgatttcggcaccggtcagtcttcactgtcttatctgacgcaactgccg
ctagatcaaatcaaaattgaccaaagctttgtgcgacacataggcaggcggccgcaagac
acattgatagtccaaaccatcataggcatggcccacaacctcggcatggaagtgattgcc
gaaggcgtcgagactcaagcgcaatgcgatttcttagtcaagcatgactgcttgctgttt
caaggttatctgttcggccggccagtgccgcttgaggatttcaatcttaatgccgcagac
aagtga
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