Polaromonas vacuolata: HC248_03279
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Entry
HC248_03279 CDS
T06542
Symbol
dppA_3
Name
(GenBank) Periplasmic dipeptide transport protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pvac
Polaromonas vacuolata
Pathway
pvac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HC248_03279 (dppA_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvac02000
]
HC248_03279 (dppA_3)
Transporters [BR:
pvac02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HC248_03279 (dppA_3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QJC57947
UniProt:
A0A6H2HDV9
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All DBs
Position
complement(3560941..3562611)
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AA seq
556 aa
AA seq
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MKIQLRKAAAAIICMLAAASSAQTQTDTRPVVKVAVQQVSTSGTLTPLREQSNVGSRSFP
MIYSALIDLDRQGDLKLIPGLATSWKRINDHTLELTLRKGVKFHNGDVMTAEDVVFTFGP
AYMFGNTQPVRTGQVASTIRVNESQAANAPAKPAAAKGLAPTLPPEVPAIARRLWPSLEK
VQIIDKYTVRFINTVPDVTMEGRLARSGSEIISKRAFMEAKDWASWARNPISAGPFKIKS
FTPDNVLVLAAHDAYFGGKPTVREVRYQVVPEVSGRVNGLLSGEYDFVTDIPPDQIKTIE
ANPKFEVVGGPVLNHRLIVFDKTNPQLADPRIRLAMAHSIDREAIVNALWSKRTSVPAGL
QWEYYGPMFQKDWTVPKYDPQLAKKLLREAGYKGEAIPFRVLNNYYTNQVQTAQVLTEMW
RAVGLKIDLQMKENWQQIFDQSTPRGIRDWSNSAPFNDPVSSIVNQHGPNGQQQQIGEWT
NSEFNTLSTLLENSTDMQQRSQAFHRMLEIAEREDPAYTVLHRNAVFYGKRKDIAWKWSP
TFTMDFTAVNLRYPNP
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcagcttagaaaggcggcggcagcgattatttgcatgcttgccgctgcctcg
tcggcacagactcagaccgatacgcgcccggtcgtcaaggtggcggttcagcaggtttca
acctctggcacgctgactcctttgcgtgagcaaagcaatgtgggctcgcgtagttttccg
atgatttactcggccttaattgatcttgatcggcagggtgatctcaaactcattccaggc
ttggccacttcttggaagcgtattaacgatcacacgttagagttgacattgcgcaaaggc
gtgaagtttcataacggcgatgtcatgacggccgaagatgtagtgtttacatttggaccg
gcctatatgtttggcaatacccaaccggtgcgcaccggccaagttgctagcaccattcgt
gttaacgagagtcaggccgccaatgcacccgctaagccagctgcggccaagggcttagcc
ccgacactgccgccagaggtaccggcaattgcccgccggctttggccatcgttagagaaa
gttcagataattgataagtacacggtgcgttttatcaatactgttccggatgtcaccatg
gaagggcggctggcccgttcgggttctgaaattatttccaagcgcgcctttatggaggcc
aaagactgggcctcgtgggcgcgcaatcctatcagtgctgggccgttcaagatcaagtct
ttcacgccagacaacgtcttggtgttggccgctcatgatgcgtatttcggcggcaaacca
acggttcgtgaagtgcgttatcaggtggtcccagaagtctctggccgggtcaatggcttg
ctcagcggtgagtatgactttgtcaccgatattccgcccgatcagattaaaaccattgaa
gccaatcccaagttcgaagtggtcggtggcccggttctgaatcaccgcctgattgtgttt
gataaaaccaatccacagctggccgacccgcgcattcgcttggcgatggcgcattcgatt
gaccgcgaagcgattgtgaatgcgctctggtctaagcgcaccagcgtacccgccggtttg
cagtgggagtattacggcccgatgtttcaaaaagactggactgtgccgaaatatgacccc
caactagccaaaaaattactccgcgaggctggttacaagggcgaagccattccttttcga
gtgctgaacaactactacaccaaccaagtgcagaccgcgcaagtactgaccgaaatgtgg
cgtgcagtgggtttgaaaatagatttgcaaatgaaggaaaactggcagcaaatttttgac
cagagcacaccgcgcggcattcgtgattggtcaaattccgctccgtttaatgatccggtt
agttctattgtcaaccaacacggcccgaacggacaacagcagcaaatcggggagtggacg
aattctgagttcaatactttgtcgaccttgttagaaaattcaaccgacatgcagcagcgc
agccaagcctttcaccgcatgttggaaattgctgagcgtgaagacccggcctataccgtg
ctgcaccgcaatgcagtgttttatggcaagcgcaaggatattgcgtggaagtggtcgccc
accttcactatggatttcacggcggtcaatctacgttatccaaatccatga
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