Polaromonas vacuolata: HC248_03347
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Entry
HC248_03347 CDS
T06542
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pvac
Polaromonas vacuolata
Pathway
pvac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HC248_03347 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvac03400
]
HC248_03347 (ung)
Enzymes [BR:
pvac01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HC248_03347 (ung)
DNA repair and recombination proteins [BR:
pvac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HC248_03347 (ung)
Prokaryotic type
HC248_03347 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QJC58010
UniProt:
A0A6H2HDV3
LinkDB
All DBs
Position
complement(3630648..3631391)
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AA seq
247 aa
AA seq
DB search
MQSSFLPVDDQLLRAEPADWLVAPGWQALVNDFFTSTTGQDLLTFLRQRIAAEAVIFPPQ
PLRALELTAPEKTRIVILGQDPYHARGQAEGLAFSVAPGVRPPPSLRNIFKEIERDLKTA
APTFPVPGGSLVSWAESGVLLLNTCLTVEESRPASHAGKGWELLTDKVICQLSQANHAVL
FLLWGAHAQSKRSMIDESRHQVLVANHPSPLSALRGPLPFIGCGHFSVAKRWCESSNKNG
FLQLITV
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccagttttttgccagtagacgatcaactgctgcgcgcagagccggctgactgg
cttgtcgcgcccggctggcaagcgcttgtgaatgacttttttaccagtacgacgggccaa
gatttgttgacatttttgcgtcagcgaattgcagctgaggcggttatatttccgccccaa
ccgctgcgcgcgcttgagctcacagcgcctgagaagacgcgcattgtgatactcggccaa
gacccttatcacgctcgtggacaagctgaggggctggctttttcagtcgcgccaggtgta
cggccaccgccatcactacgcaatatattcaaggaaattgaacgtgatttaaaaacagca
gcgccaacttttccggtgcctggcggcagcttggtgagctgggctgaaagcggtgtgctg
ctgctcaatacctgtctgacagtagaagaatcaaggcctgcgagccacgccggtaaaggc
tgggagttattaaccgacaaagtaatttgtcagttgtcgcaagccaatcacgcggtgctg
tttttgctctggggtgcgcatgcgcaatcgaaacgctcaatgatcgatgagagccggcat
caagtgctggttgccaaccatccttcaccgctgtcggcattgcgtgggcccctgccattt
attggctgcggtcacttttccgttgccaagcgctggtgtgagtcatcgaataaaaatgga
tttcttcagttaattacggtttaa
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