Polaromonas vacuolata: HC248_03513
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Entry
HC248_03513 CDS
T06542
Symbol
rnaSA3
Name
(GenBank) Guanyl-specific ribonuclease Sa3
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
pvac
Polaromonas vacuolata
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvac03019
]
HC248_03513 (rnaSA3)
03016 Transfer RNA biogenesis [BR:
pvac03016
]
HC248_03513 (rnaSA3)
Enzymes [BR:
pvac01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
HC248_03513 (rnaSA3)
Messenger RNA biogenesis [BR:
pvac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HC248_03513 (rnaSA3)
Transfer RNA biogenesis [BR:
pvac03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
HC248_03513 (rnaSA3)
Prokaryotic type
HC248_03513 (rnaSA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
Motif
Other DBs
NCBI-ProteinID:
QJC58176
UniProt:
A0A6H2HFD8
LinkDB
All DBs
Position
3811006..3811491
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AA seq
161 aa
AA seq
DB search
MFKSVWRSRSLKSSKSEKTQSKQWIKATAAMRLFFSVAVIGVAGLVSLSFSVVHARTLSD
AQTQKLDMVSVSRLPAQAQDMLTLIYQGGPFRYDKDGVVFGNRERILPAKDRGFYREYTV
RTPTERSRGARRIVCGGLKPAAPDACFYTDDHYASFRKIVQ
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaagcgtgtggcgctcaagaagcttaaaaagctcgaaatcagagaaaacccaa
agcaagcaatggattaaagctacggctgcaatgcgcttgtttttctcggtcgccgtgatc
ggtgtggcaggtctagtaagtttgagttttagcgtagttcacgccagaacactttcagat
gctcagacccaaaagctggacatggtttcagtttctcgcttacccgcacaagctcaggac
atgttgacgcttatttatcaaggcggaccattcaggtacgacaaagatggagtggttttt
ggtaaccgggaacgaattctccctgctaaagaccgaggattttatcgggaatataccgtc
aggacgccaacagagcgcagtcggggagcccggcgcatagtttgcggtggcttaaaacct
gctgcgcccgatgcgtgtttttacaccgatgaccactacgcgagttttcgcaaaatcgtt
cagtaa
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