Planctellipticum variicoloris: SH412_000226
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Entry
SH412_000226 CDS
T09866
Symbol
rsgA
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar00730
Thiamine metabolism
pvar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SH412_000226 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvar03009
]
SH412_000226 (rsgA)
Enzymes [BR:
pvar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
SH412_000226 (rsgA)
Ribosome biogenesis [BR:
pvar03009
]
Prokaryotic type
GTPases
SH412_000226 (rsgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
AAA_16
ABC_tran
AAA_29
FeoB_N
eIF-1a
RsgA_N
AAA_23
nSTAND1
NTPase_P4
AIG1
AAA_21
Motif
Other DBs
NCBI-ProteinID:
WLD10164
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All DBs
Position
complement(285682..286731)
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AA seq
349 aa
AA seq
DB search
MTRDVQAEGVDHDQGLRDERISGKGDLSRRRTIVGAEVSGDQIVRAVDESLCRPGRVVSA
IGATQCTVKLDDGRVLSCTIRRVVRTLTRDARNAVVTGDRVLVQTATDTTGVIERVEPRQ
GVLARGQQYRQHILVANISQVAIVASADDPPLKPALIDRFVVSAGKGGVRAVICINKADL
IEPADLQPMIGLYSRLGCPAVLTSVQSGRGIAALKRLLVGQETVFTGQSGVGKSSLLNAI
QPDLGLRTGEISEVTQKGRHTTRYARLIELGCGGWVVDTPGIRQLEIWDVHPAEVEGYFR
EFHPFVPYCRFPSCMHLYEEGCAVKRAVKDDLISMTRYESYVRIVTADT
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcgacgttcaggccgaaggggtcgatcacgatcagggactgcgcgacgaacgg
atctcggggaaaggggacctgtcgcgccggcggacgattgtcggggccgaagtctcgggc
gatcaaatcgtccgggcggtcgacgaatcgctgtgccggccgggacgggtggtctcggcg
atcggcgccacgcagtgcacggtcaagctggacgacggccgcgtgctgtcctgcaccatc
cgtcgagtcgtccggacgctgacgcgggacgcccgcaacgccgtcgtcacaggcgaccgg
gttctggtgcagacggcgaccgatacgaccggcgtgattgagcgggttgagccgcggcag
ggggtgctggctcgcgggcagcagtaccgccagcacattctggtggcgaacatttcgcag
gtggcgatcgtggccagcgccgacgatcctccgctgaaaccggcgttgatcgaccgtttc
gtcgtgagcgccggcaaagggggcgtgcgcgccgtgatctgcattaacaaggcggacctg
atcgaaccggcggatctgcagccgatgatcgggctctactcccggctcggctgtcccgcg
gtgctgacgagcgtgcagtcggggcgcggcatcgcggcgctgaagcgattgctcgtgggg
caggagacggtatttaccggtcagagcggcgtcgggaagtcttcgctgctgaacgcgatt
cagccggatctggggctgcggacgggggagatcagcgaggtcactcaaaagggacggcat
accacgcggtatgcccggctgattgaactcggctgcggcggctgggtggtggatacgccg
ggcatccggcaactggagatctgggacgtgcacccggccgaggtggaggggtacttccgc
gagtttcacccgttcgtgccgtactgtcggtttccgagctgcatgcacctgtatgaagag
gggtgcgccgtcaagcgggcggtcaaggacgacctgatctccatgacccgctacgagagc
tacgtccggatcgtgacagcggatacgtga
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