Planctellipticum variicoloris: SH412_000337
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Entry
SH412_000337 CDS
T09866
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SH412_000337
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvar02000
]
SH412_000337
Transporters [BR:
pvar02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SH412_000337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
IBP39
Med26
Motif
Other DBs
NCBI-ProteinID:
WLD10271
LinkDB
All DBs
Position
425674..428139
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AA seq
821 aa
AA seq
DB search
MIAGCSRSFPLTARRLTACLCLLLAGLCGAAGAQEEVEPPLPKFEDLQVPEYEALLSGRP
VDWFVLTTEQKVLFVEPVQPRPGTLTDLATKYEASFKWPKPRNKDEQREQTEKRALLQRL
RISLWDAPGESEYLIETRVIERIIYFEDLILQRVQLLLDQNDTLRAYELLTLIDRRQRGW
PESDKAIQRFHYVEAGVQLTNDRPEDALRSLEALLAMNPQYEGMSERAGEAVNILVQRAV
DASDFRGARHYLARLARFRPEHSVYLRWKQELLSRTQSEMQIASMLARDDPRAAAHRIDA
AARIWPDTPGLRELHRSLLEAAQFLKVGVLTFAGDSPAYPFPTRADLRSRSLTELRLFEP
GRIDESGVRYRSGICEEWEPTDLGRELRLNVAARRALWESRPGISALEIQQTLQRRLDPA
SPDFDERIAALVTGVEARSPWEVVISFRTPPLRPESLLALPLLAPPGDSDLAADLTPGAR
RALGRGNASLAARFQLERRDDDDQSLLRVREPNGKSKQRYLTDLDEHRYESWERSLQALL
RGDADILPYARLADAKLLQSDGRFFTVPAAIPETHLLQINPESAALKNGPLRRALLAAIP
REQLLRDVVLKDADPAWGRLTTAPFPISSFAYNRVLAQPVYDPLLAASLLLTARKELGLE
TVRLRLAHPGDDDIRRLCDELILAWKRVGIEVELVDPRGKPGEPPWDLAFRTLQLADPAA
ELWPLVTGAERTEIASLAPLPDRLRQSLLGLEQAGDWTTATNLIQQLQVDMLAEARWIPL
WEVEQFWIARRRLGGVPSPLLNPYHNAEKWIVQSWFPQETP
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgattgccggttgttcgagatcctttccactaacggcacggcggctgacggcgtgtctg
tgcctgttgctggccggcctttgcggcgcggccggagcgcaggaggaggtcgaaccgccg
ctgccgaagttcgaggatctgcaggttcccgagtatgaggcgctgctgagcggacgtccg
gtcgactggttcgtgctgacgacggagcagaaagttctgtttgtcgagccggtgcagcct
cgtccgggaacgctgaccgatctggcgaccaagtacgaggccagtttcaagtggccgaaa
ccccgcaacaaggacgagcagcgggagcagaccgaaaagcgcgcgctgctgcagcggctg
cgaatttcgctctgggatgcaccgggtgagagcgaatacctgatcgaaacgcgggtgatc
gagcggatcatctacttcgaagatctgattctgcagcgagttcaacttctcctcgatcag
aatgacactctgagagcctacgaactgctgaccctcatcgaccgcaggcagcggggctgg
ccggagtcggacaaggccattcaacggtttcactacgtggaagccggggtgcaactgacc
aacgatcgtcccgaggacgctttgcgatcgctggaagcgctcctggcgatgaatccgcag
tacgaggggatgtccgaacgggctggcgaggccgtcaacatcctggttcagcgcgccgtc
gacgcgagcgattttcgaggcgcccgacattacctggcgcgactggcgcgattccgtccg
gagcattcggtgtacttgcgctggaagcaggagctgctgtcccgcacgcaatccgagatg
cagatcgcttcgatgctcgcgcgggatgatccgcgggccgccgcccatcgcattgatgcc
gccgcacggatctggccggacacgcccgggcttcgcgagcttcaccgcagcctgctggag
gcggcgcagtttctcaaagtcggcgttctgacgttcgcgggcgacagcccggcttatccg
tttccgacgcgtgccgacctgcgaagtcgttctctcaccgagttgcggctgtttgaaccg
gggcgaattgatgaatcgggcgtacgctaccggagcgggatctgcgaagaatgggagccg
accgacctcggacgcgagcttcgtctgaacgtggcggcgcgacgcgccctctgggagtcg
cgtccgggaatttccgctctcgaaatccagcagacactgcagcgccgactcgatccggcc
agtccggatttcgacgaacggattgcggcgctggtcaccggggtagaggcccgttcgcct
tgggaagtggtcatcagcttccggacgcctccgttgcggccggagtcgctgctggctttg
ccgctgctggcccctccgggggactcggacctggctgcggatctgactcccggcgcccgg
cgcgccctggggcgcggaaatgcgtcgctcgcggcccgtttccagctcgaacggcgggat
gacgacgatcagtccctgctgcgcgtgcgggagccgaacgggaagtcgaagcagcggtat
ctgacggatctcgacgaacatcggtacgagtcctgggagcgatcgctgcaggcgctgctg
cggggcgacgccgatatcctgccctatgcccggctggctgatgcgaaactgctgcagtcc
gacgggcgattcttcaccgttcccgccgcgattcccgaaacgcatctgctgcagatcaat
ccggaaagcgctgcactgaagaacggccccctgcggcgggcgctcctcgcggcgatccct
cgcgagcaattgctgcgggacgtggttctgaaggacgccgatcccgcctgggggcggctg
acgacggccccgttcccgatcagcagctttgcctacaatcgcgttctcgcccagccggtc
tacgacccgctgctggcggcatccctgctcctgaccgccaggaaggagctgggactggaa
acggttcgactgcgtctggcgcatccgggagacgacgacatccgccggctctgcgacgaa
ctgattcttgcctggaagcgggtggggattgaggtcgagctggtcgatcctcgcggcaag
cctggcgagcccccgtgggatctggcgtttcgaacgctgcagcttgccgatccggcggcc
gagctctggccgctcgtgaccggggccgaacggacggagatcgccagtctcgctccgctt
ccagaccgactgcggcagagtctgctcggcctcgaacaggccggcgactggacgacggcc
acaaatctgatccagcaactgcaggtcgacatgctggcggaggcccgctggattcctcta
tgggaagtcgagcagttctggatcgcgcgtcgccggctgggaggtgtcccgtcgccgctg
ctgaatccctatcacaatgcggagaagtggattgtgcagtcgtggtttccgcaggagacg
ccctga
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