Planctellipticum variicoloris: SH412_000401
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Entry
SH412_000401 CDS
T09866
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar00220
Arginine biosynthesis
pvar00240
Pyrimidine metabolism
pvar00250
Alanine, aspartate and glutamate metabolism
pvar01100
Metabolic pathways
pvar01110
Biosynthesis of secondary metabolites
pvar01240
Biosynthesis of cofactors
Module
pvar_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SH412_000401 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SH412_000401 (carB)
00220 Arginine biosynthesis
SH412_000401 (carB)
Enzymes [BR:
pvar01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
SH412_000401 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
FGAR-AT_N
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
WLD10334
LinkDB
All DBs
Position
507125..510382
Genome browser
AA seq
1085 aa
AA seq
DB search
MPRRDDLKKILIIGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPGT
ADRTYIEPITWEYVAKILEVEKPCAVLPTLGGQTGLNTAMELHRRGILERLGVELIGARA
DVIKKAEERDLFKQAMLKIGLDVCKSRAVRNMDQAYQALEELGLPMIIRASFTLGGTGGG
VAYNRQEFDEKVRKGLSLSPVSEVLLEESIIGWKEYEMEVMRDVADNVVIICAIENFDPM
GVHTGDSITVAPAQTLSDKEYQRMRDATIAVMREIGVETGGSNVQFAIDPKSGRMIVVEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYRLDELANDITRETLACFEPTIDYVVTKIPR
WTFEKFPEADTELTVQMKSVGETMAIGRTFKESLQKALRGLEIGHFGLGGGSKDLWGGDR
QPSTDEIESKLARPNEERIFYIRYAFKAGMTIEHIHELTRIDPWFLENIRQLLLAEDEIN
AVGRLDAVSPAQMRRFKQYGFSDRQLAYWWDSIEPEVRARRVELGVIATFKQVDTCAAEF
EAYTPYYYSTYESEDEAPGPRTDGKRRVVILGGGPNRIGQGIEFDYCCCQASYALRELGI
ESVMVNSNPETVSTDYDTSDLLFFEPLTTEDVLNICDRLQPDGVIVQFGGQTPLNLARGL
ERAGVKIIGTSPAMIDAAEDREQFQAILNKINLRQPENGIAVDVAGARQIANRIGYPVLV
RPSFVLGGRAMVICYDEDQVQRYMIEAVSASPDRPVLIDKFLEDAIEVDVDAISDGETTL
VGGVMEHIEEAGVHSGDSACVLPPYSLPDSVVQEIKQATYALAAELQVCGLMNVQYAVKH
TGGEYQVYVLEVNPRASRTSPFVSKATNLSLARMAAKVMVGTTLKEQGITTEVTPKHVSV
KESVFPFNRFAGVDIILGPEMKSTGEVMGIADDFPVAYLKSQIAAGNALPRTGAVFISLC
GPHKYQIIPSARRLKEMGFRIVATSGTARVLREAGIEVDIVRKLQEGRPNLLDLMANSEI
QFIFNTPSGKGPRTDEGRIRAAAVINGVPCATTLPGCIAVVQALEALARQPEPQVCTLQD
WAKKG
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcgtcgcgacgatctgaagaagattctgattatcggttccggccccatcgtcatc
gggcaggcctgcgaattcgattactccggaacccaggcctgcaaggcattgcgcgaagag
ggctacgaggtcgttctggtcaattccaatcccgcgacgatcatgaccgaccccgggacc
gcggatcggacctacattgagccgattacctgggaatatgtcgccaaaatcctggaagtc
gagaagccctgcgcggtgctgccgacgctcggcggtcagacaggtctcaacacggcgatg
gagctgcaccgccgcggaatcctcgaacggctcggcgtcgagctgatcggcgcccgggct
gacgtgatcaagaaggccgaagaacgcgatctgttcaaacaggccatgctgaaaatcggc
ctcgacgtctgcaagagccgggctgtccgcaacatggaccaggcctatcaggcgctcgaa
gaactcggtctgccgatgatcatccgggccagcttcacgctcggggggacgggcggcggc
gtcgcctacaaccgccaggaattcgacgaaaaagtccgtaaaggactctccttgtcgccg
gtcagcgaggtgctcctcgaagagtccatcatcggctggaaagaatacgagatggaagtg
atgcgcgacgttgccgacaacgtcgtcatcatctgcgccatcgaaaatttcgatccgatg
ggggtccacaccggcgactcgatcaccgtcgcccccgcccagacgctgagcgacaaagag
taccagcggatgcgcgacgcgacgatcgccgtcatgcgggaaatcggcgtcgagaccggc
ggctcgaatgtgcagttcgcgatcgacccgaaatcgggccggatgatcgtcgtcgagatg
aatccccgcgtcagccgttccagtgcgctcgcgtccaaggcgaccggcttcccgatcgcc
aaaatcgccgccaaactggccgtcggctaccggctcgacgagctcgccaacgacatcacc
cgcgaaacgctggcctgcttcgaaccgaccatcgactatgtcgtcaccaagattccccgc
tggaccttcgaaaaattccccgaagccgacacggaactgaccgtccagatgaagtcggtc
ggcgagacgatggccatcggccggactttcaaggaatcgcttcagaaggcccttcgcggc
ctcgaaatcggccacttcgggctcggaggcggctcaaaggacttgtggggcggcgatcgc
cagccctcgaccgacgaaattgaaagcaaactggcccgccccaacgaggaacggatcttc
tacatccggtatgcgttcaaggcagggatgaccatcgagcacattcacgagctcacccgc
atcgacccgtggttcctggagaatatccgccagttgctcctcgcggaggacgaaatcaac
gccgtcggccggctggacgccgtttcgccggcgcagatgcggcggttcaagcagtacgga
ttctccgaccggcaactcgcctactggtgggactcgatcgaaccggaagtccgcgcccga
cgggtggagctgggcgtgatcgcgacgttcaagcaggtcgacacctgtgcggcggagttc
gaggcgtacaccccatactattattcgacgtacgagtccgaggacgaggctcccggaccg
cggaccgacggtaagcggcgcgtcgtcatcctcggcggcggacccaaccggatcggccag
gggatcgagttcgactactgctgctgccaggcctcgtatgccctccgcgaactgggcatc
gagagcgtgatggtcaactccaaccccgaaaccgtgtcgaccgactacgacacatccgat
ctgctgttcttcgaaccgctcaccaccgaagacgtgctcaatatttgcgaccgcctgcag
ccggacggcgtcatcgtccagttcggcggccagacgcccctgaacctcgcccgcggactg
gaacgggcgggcgtcaagatcatcgggaccagcccggcgatgatcgacgccgccgaggac
cgcgagcagttccaggcgatcctcaataagatcaacctgcggcagccggagaacgggatc
gccgtcgatgtcgccggcgcccgccagatcgccaaccgcatcggttatcccgtgctcgtc
cgtcccagcttcgtgctcggcggtcgcgcgatggtaatctgctacgacgaagatcaggtg
cagcggtatatgatcgaggcggtctcagcctcgcccgatcgccccgtgctgatcgacaag
ttcctggaagacgccatcgaggtcgacgtcgacgccatctccgacggcgaaacgacgctg
gtcggcggcgtgatggagcacatcgaagaagccggcgttcactcgggcgactccgcctgc
gtcctgcccccttactcgctgcccgattccgtcgtgcaggagatcaagcaggcgacgtat
gcactggcggcggaactgcaggtctgcggcctgatgaacgtgcaatatgccgttaagcat
actggcggcgaataccaggtctacgtgctggaagtcaatccccgcgccagccggacgtct
ccgttcgtctccaaggcgacgaacctttccctggcccgcatggcagccaaggtgatggtc
ggtacgacgctcaaggaacagggcatcacgactgaagtgacgccgaagcacgtttcggtc
aaggaaagcgtcttcccgttcaaccgcttcgccggcgtcgacatcattctcggtccagag
atgaaatcgacgggtgaggtgatgggaatcgccgacgacttccccgtggcctatctgaag
agtcagatcgcggcgggaaatgccttgccgcggacgggagcggtcttcatcagcctgtgc
ggcccgcacaaataccagatcattccttccgcccgccggctgaaggaaatgggtttccga
atcgtggccacctccggcaccgcccgcgtgctgcgggaagccggcatcgaggtcgacatc
gtccgcaagctgcaggaaggccggccgaacctgctcgacctgatggccaactcggagatc
cagtttatcttcaacacgcccagcggcaaggggccgcggaccgacgaaggccggatccgc
gccgccgccgtgatcaacggcgtcccgtgcgccaccacgctgccgggctgcatcgcggtg
gtccaggcactggaagccctcgcccgccagcccgaaccgcaggtctgcaccttgcaggac
tgggcgaagaaggggtag
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