Planctellipticum variicoloris: SH412_000434
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Entry
SH412_000434 CDS
T09866
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
pvar
Planctellipticum variicoloris
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
SH412_000434
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GFIT
Motif
Pfam:
HH_YBHG
BSH_RND
BSH_CzcB
Beta-barrel_RND_2
Beta-barrel_AprE
Beta-barrel_YknX
BSH_YknX
HH_MFP_RND
HH_EMRA
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
WLD10366
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Position
complement(554918..556111)
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AA seq
397 aa
AA seq
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MSGRLGWLLAVLFASSTVWLFLFPIGQGVKSETSPSPEAAALREKLRSASDGGAISVGHD
AAAPATIVLESKGYIIPEQQILVSPQVSGRVIELNFDAGYQVQEGDVLAVLDSTEYRADL
DRANGMVAAARARYNELHVGSRPDEIVQARAELDEAETTLEQTERDYLRTKDLRRQNIAT
VQEYEQAESTFRAQAKRVARLEAALRLMQEGPREEKVLAAMAELQQAEAEVRRSTWRLEN
TTIRAPISGTILKKNAELGNLVNPIAFNGSFSLCDIADLSKLEVELTIQERDISKVFAGQ
ACKLRAEAFPKRIYEGVVSRLMPIADRAKGAIPVRVRVEMPPGEEGQYLKPEMGAIVQFF
SSSRETVANSDLTDQAVSNDPASALTPANVSAVPRRL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggcaggctcggctggctgcttgccgtcctgtttgccagctcgacggtctggctg
ttcctgtttcccatcggccagggcgtgaagagcgagacgtcgccgagccctgaagcggct
gcgctgcgtgagaaactgagatccgctagcgacggaggggcgatatcggtcggacatgat
gcggcggcgcccgcgacgatcgtgctggagtccaagggctacatcattccggaacagcag
attctggtcagcccgcaggtcagcggtcgcgtgatcgagctgaattttgacgcaggctat
caggttcaggaaggggacgtgctggcggtgctcgacagcaccgaatatcgggccgatctg
gaccgggccaacggcatggtggcggcggccagagcccgctacaacgagcttcacgtggga
agccggccggacgagatcgtccaggcccgggcggaacttgatgaagcggaaacgacgctc
gagcagaccgagcgggactatttgcggaccaaagatcttcgccggcagaacattgccacg
gtccaggaatacgaacaggccgagagcacgttccgggctcaggcaaagcgagtcgcgagg
ctggaagcggcgctgcggctgatgcaggaagggccgcgtgaagaaaaagtcctggcggca
atggccgaattgcagcaggcggaggcggaagtccggcgatcaacgtggagactcgagaac
acgacgatccgtgcaccgatctcgggcacaattctcaagaagaacgctgagttgggcaat
ctcgtcaacccgattgcgttcaacggttcgttcagtttgtgcgatattgccgacttgtcg
aagctggaggtcgagttgacgatccaggagcgggacatttccaaagtcttcgccggtcaa
gcctgtaagctgcgggccgaggcctttccgaaacggatctacgagggtgtcgtctcgcga
ctgatgccgatcgccgaccgggccaagggagcgatccctgtgcgggtccgcgtcgaaatg
cctcccggagaagagggacagtatctgaagccggaaatgggcgcgatcgtccagttcttt
tccagttcccgggaaacggtggccaattcggacctcacggatcaggccgtatcaaacgat
cccgcgtcggctctgaccccggccaatgtttcagcggtccctcgtcgactgtga
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