Planctellipticum variicoloris: SH412_000565
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Entry
SH412_000565 CDS
T09866
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar02010
ABC transporters
pvar02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SH412_000565
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
SH412_000565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvar02000
]
SH412_000565
Transporters [BR:
pvar02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
SH412_000565
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
ABC_sub_bind
DAGK_cat
DUF7537
Motif
Other DBs
NCBI-ProteinID:
WLD10492
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All DBs
Position
722043..723035
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AA seq
330 aa
AA seq
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MKRCLVLACAVILAAGCSGGGGATPAGTADGGTKTLRIAMIPKGTTHEFWRSVHAGAEKA
AKELGGVEILWKGPATEDDRESQISLVQEFIVQKVDGICLAPLDAAALVPYVEESVEKKI
PVVVFDSGLAKEDAIVSYVATDNRKGGELAAHRLAEVLGKQGNVIMLRYNKGSESTEQRE
EGFLETLSKDYPDIKVLSSDQYAGTKPEQSLANADQILRKYKDEVNGIFAVCEPNATGVL
KALENLDLATKVKFVAFDPNAPLIAGLEAKKVDGIVLQDPVTMGYDSVMAMVKHLRGEKV
EKRISTGEYVATPENMHDEQMTKLLKPEQH
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgatgtctggtgctggcgtgtgccgtgattctggccgcaggctgttccggcggc
ggcggtgcaacccccgccggcacggccgacggcggaacgaaaacgctccggatcgcaatg
attcccaaaggaaccactcacgaattctggcggtcggtccacgccggcgccgagaaggcg
gcgaaggaactggggggcgtggaaatcctctggaaaggccccgcgaccgaggacgatcgc
gaaagccagatcagcctggtgcaggaattcatcgttcagaaagtcgacggcatctgcctg
gcgccgctcgatgccgcggccctggtgccatatgttgaggaatccgtcgaaaagaagatc
ccggtcgtggtcttcgacagcgggcttgcgaaagaggacgcgatcgtctcctacgtggcg
accgacaatcgcaaagggggagaacttgccgcgcaccgcctggcggaagttctgggcaag
cagggcaacgtcatcatgcttcgatacaacaaagggagcgagagcaccgagcagcgagaa
gagggcttcctggaaactctttcgaaggattatccggacatcaaggtcctttcgtcggac
cagtatgcggggaccaaacccgaacaatcgctggccaacgccgaccagattctgcgcaag
tacaaggacgaagtgaatgggatcttcgcggtctgcgagcccaacgcaaccggcgttctg
aaagccttggagaatctcgatctggcgaccaaggtcaagtttgttgccttcgacccaaac
gccccgctgatcgccgggctggaagcgaagaaggtcgacgggatcgtcctgcaggacccc
gtcacgatgggctacgattctgtaatggcgatggtcaagcaccttcgcggcgaaaaggtc
gagaagcggatcagcaccggcgagtacgtcgccacgccggagaacatgcacgacgagcag
atgacgaaactgctcaaaccggagcagcactga
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