Planctellipticum variicoloris: SH412_000566
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Entry
SH412_000566 CDS
T09866
Name
(GenBank) sugar ABC transporter ATP-binding protein
KO
K10562
rhamnose transport system ATP-binding protein [EC:7.5.2.-]
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SH412_000566
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvar02000
]
SH412_000566
Transporters [BR:
pvar02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
SH412_000566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
TsaE
AAA_30
RsgA_GTPase
AAA_29
AAA_16
MMR_HSR1
AAA_23
AAA_15
Rad17
MukB
Motif
Other DBs
NCBI-ProteinID:
WLD10493
LinkDB
All DBs
Position
723177..724667
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AA seq
496 aa
AA seq
DB search
MSLLQMTGVSKRFGGTQALRNVSLSVLPGRVLALIGENGAGKSTLMKILSGAHPPDSGVM
QLDGRPYAPSGPLGARRAGVAMIYQELNLAPHLSVEDNIMLGQEARRFGCLLRRSVQRPR
VREALDWLGHPDLRPETPVGELSVAAQQLVEIARALVLDAKVIVFDEPTSSLPQRDVRRL
FEVVRRLKEQGRGIVYISHFLEEVRELCDDYAVLRDGESVGSGDLAGVTEEQIVSLMVGR
TVEELFPSVPHTAGDTVLQVKDLSGRRSPRDVRLELKRGEIFGLAGLVGAGRTELIRCLF
GLDAVRSGRVQVAALTPAASPRSRMQAGLGMVSEDRKREGLAQGQSIADNLTLSRLSPYA
SAGWLNLSRRREAVSHWLRRLQVKCRDQEQMIGELSGGNQQKVAIARVLHQGAEILLLDE
PTRGIDVGTKSEIYRLMGELAASGKTVLFVSSYLTELLAVCDRIGVMSRGRLREVRPTGE
WTEESIMNVAVSGEGE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtccctccttcagatgaccggtgtttcgaaacgcttcggcgggacgcaggccctgcgg
aacgtgtcgctctccgtactgcccgggcgggtgctggcgctcattggcgagaacggggcg
ggcaaaagcacgctgatgaaaatcctcagcggggcgcatccgcccgattcgggagtgatg
cagctcgacggccggccctatgcaccgtccgggccgctgggcgcccggcgggccggggtc
gcgatgatctaccaggagctgaacctcgccccgcatctgtcggtcgaggacaacatcatg
ctcgggcaggaggcccgccggtttggctgtctactgcggcggtcggtacagcgaccgcgg
gtccgcgaggcgctcgactggctgggacatcccgacctccggccggagacccccgtcggc
gaactctccgtggcggcccagcagcttgtggaaatcgcccgggctctggtgctcgacgcc
aaggtgatcgttttcgacgagccgaccagttcgcttccgcagcgcgacgtgcggcggctg
ttcgaagtcgttcggcgactgaaggagcaggggcggggaatcgtttatatcagccacttt
ctcgaagaagtccgggaactgtgtgatgactatgccgttttgagggacggagaatccgtc
ggttccggcgatctggcaggagtgacggaagagcagatcgtctcgctgatggtggggcgt
acggtcgaggagctgttccccagcgtgcctcacacggccggtgacactgttctgcaggtg
aaagacctctccggccggcggtccccgcgggatgtacgactggaattgaaacggggagag
atcttcggcctggcgggcctcgtcggagcggggcggactgaactgatccgctgcctgttc
ggactcgacgccgttcgatcgggccgcgtgcaggtcgcggcgctgacgccggcggcttcg
ccccggagccggatgcaggccggtctgggaatggtctccgaggaccgcaagcgggagggg
ctggcgcaggggcagtcgatcgccgacaatctgacgctcagccggctgtccccctatgcc
agcgccggctggttgaatctgagccgacggcgggaagccgtctcccactggctgcggcgg
ctgcaggtcaaatgcagggaccaggaacagatgatcggcgagctgtcgggcggcaatcag
cagaaagtggcgatcgcccgcgtgctgcatcagggagccgagattctgctgcttgacgag
ccgacgcgcgggatcgatgtgggaaccaagtcggagatctatcggctgatgggcgaactg
gccgcctccggtaagacggtcctctttgtcagctcgtacctgaccgagctgctggcagtc
tgcgaccggatcggcgtgatgagccggggacgtctgcgggaagtccgtccaaccggcgag
tggactgaagagtcaatcatgaatgtcgccgtcagtggagagggagagtag
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