Planctellipticum variicoloris: SH412_000588
Help
Entry
SH412_000588 CDS
T09866
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SH412_000588
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvar02000
]
SH412_000588
Transporters [BR:
pvar02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SH412_000588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
ATP-synt_ab
AAA
AAA_18
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WLD10514
LinkDB
All DBs
Position
complement(750847..752718)
Genome browser
AA seq
623 aa
AA seq
DB search
MSDIAPLLEIDGLKTCFRTDGSVVKAVDGLALKIRPGQTLGLVGESGSGKSVTSLSIMRL
LPDVGASIEGGSISFLGRNLVQLPIAEMRKLRGRDISMIFQEPGTSLNPVYRVGWQVMEA
IRLHQKVSVEEARARAIELFREVGIPEADRRIDSFPHEMSGGQKQRVMIAMALSCNPKLL
IADEPTTALDVTIQAQILDLIRRLRDERGMAVLFITHDLGVIAEIADEVAVMYRGKLVEY
KPVVELFRNPEHPYTRGLLACRPRLEATRRRLPTVADYMESSTGPDGELLIVEKTLGPER
LAEIEGRGRGRLLHPESELKAGGIEWKPADDPAGTALVPEGTPPLLDVRDLQVYYPIRKG
FFRHVAGFVKAVDGISFKVYKGQTLGLVGESGCGKTTTGRALMRLTAITGGDVTFDGLRW
SSLRGRELRSHRRRMQIVFQDPYSSLNPRMTVETMLTEAMAVHRLGASARDRRDRAASLL
HEVGLLSEHLDRYPHEFSGGQRQRLCIARSLAVEPEFLICDESVSALDVSVQAQVLNLLK
DLQEERGLTYIFISHDLGVVKFMSDMMAVMNAGKIVEFGPSDRIYANPANEYTRQLIASI
PQASLAAIERRQSDRVEMAVRRR
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacattgcgccgctgttagagatcgacggactcaagacctgctttcgcacggac
gggagcgtcgtcaaagccgttgacggtctggcgctgaagattcgccccggacagacgcta
ggcctggtgggcgagtccgggtcgggcaagtcagtcacgtcgctgtcgatcatgcggttg
ctgccggacgtcggcgcgtcgatcgaagggggcagcatctcctttctcggacgaaatctc
gtccagttgccgatcgccgagatgcgcaaactccgcggccgcgacatcagcatgatcttc
caggagcctgggacgtcgctgaacccggtctatcgcgtcggctggcaggtcatggaagcc
atccggctgcaccagaaggtctcggtcgaagaagctcgcgcacgggcgatcgaactgttt
cgggaagtcggcattcccgaggccgaccggcggatcgacagcttcccgcacgaaatgtcc
ggcgggcagaagcagcgggtcatgatcgcgatggccctgagctgcaatccgaagctgctg
attgcggatgaaccgacgaccgccctcgacgtgacaattcaggcccagattctcgacctg
atccgccgactgcgggatgaacggggcatggccgtgctgttcatcacgcacgacctgggg
gtcatcgcggaaatcgcggacgaagtggcggtgatgtaccgcggaaaactggtcgagtac
aaaccggtcgtggagctgttccgaaatccggaacatccctacacccgcggattgctcgcg
tgccgaccgcgactggaagcgacccgccgccgattgccaaccgttgcggactacatggaa
agctcgaccggaccggatggcgaactgctgatcgtcgaaaaaaccctcggtcccgaacgg
ctggcagaaatcgaaggccgggggcgaggccgactgctccacccggagtcggaactgaaa
gcaggcggcatcgagtggaagccggcagacgatccggccgggaccgcgttggttcccgaa
gggacgccgccgctgctcgacgtccgcgatctgcaggtgtattacccgatccgcaagggg
tttttccgacatgtggccggttttgtgaaggctgtcgacgggatctcgttcaaagtctac
aagggccagaccctcgggctggtcggcgaatcgggctgcggcaagacgaccaccggccgg
gctctgatgcggctgacggcgatcaccggcggagacgtgacattcgacggactccgctgg
agctcgttgcgagggagggaactgcggtcccatcgccgtcggatgcagatcgtgtttcaa
gatccttacagttcgctgaatccccgcatgaccgtcgaaaccatgctgacggaagcgatg
gcggtccatcggctcggtgcgtcggcccgcgaccgacgggatcgggccgcctcactgctg
cacgaagtcgggctcctctccgagcatctggaccgttatccccacgaattcagcggcggg
cagcgccagcgcctctgcatcgcacggtcgctggccgtcgagcccgagtttctgatctgt
gacgaatcggtctcggccctggacgtctccgtgcaggctcaggtgctcaatctgttaaag
gacctgcaggaagagcgaggattgacgtatatcttcatcagccacgatctgggcgtggtg
aagttcatgtcggacatgatggccgtgatgaacgccgggaagatcgtcgagtttggcccc
tccgaccggatctacgcgaatccggcgaacgagtacacgcgccagttgatcgcgtcgatt
ccgcaggcctcgctcgccgcgattgagcgccggcagtcggaccgggtggaaatggccgtc
cggagacgctga
DBGET
integrated database retrieval system
