Planctellipticum variicoloris: SH412_000797
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Entry
SH412_000797 CDS
T09866
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pvar
Planctellipticum variicoloris
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvar03016
]
SH412_000797 (miaB)
Enzymes [BR:
pvar01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
SH412_000797 (miaB)
Transfer RNA biogenesis [BR:
pvar03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
SH412_000797 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
WLD10720
LinkDB
All DBs
Position
1022232..1023764
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AA seq
510 aa
AA seq
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MTTPHNCKLYIETVGCQMNMLDSELVVAALRKQGYELTGDVGEADTVLFNTCSVREHAEH
KIYSALGRLKFSKQQRPQQVIGVMGCMAQKDQELIFRRAPHVDMVVGTGQLAEVPRMVAE
AREQRGRALAVSLDRRDGTRTEVAGSFLSYDPLREPQMRPSPYQAFVRIMIGCDKFCTYC
VVPTTRGPEQSRSPRDIVHESRILAEQGVKEITLLGQTVNSYKFTEEGRVHRLSDLLAAI
HEIPGILRLKFVTNYPKDMTTELLQTLRDLPKCSHYLHVPLQSGCDEMLKRMKRGYTVEH
YREMMGRINDILPDAAVSSDFIVGFCGETEEAHQKSLDSIREFRFKNSFIFKYSPRPGTK
AYDLLPDDVPEEVKRRRNAELLTLQNQISAEDNARFIGRTVEILVEGPSKAALKSEFALE
GWVPPIPDNVATPTELTSLELPVVAEPDRPQIQLTGRTMCDRIVVFDGNPRLAGTLARIQ
IEDCSPTTLLGSIETRQIQHGSNSLLPILA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgccccataactgcaagctctacatcgaaaccgtcggctgccagatgaatatg
ctggacagcgagctggtcgtggcggcgttgcgcaagcaggggtacgagctgaccggcgac
gtcggcgaggccgatacggttctgttcaacacctgcagcgtccgggagcatgcggaacac
aagatttacagcgccctgggtcggctgaagttcagcaagcagcagcggccgcagcaggtg
atcggcgtgatgggctgcatggcccagaaagatcaggagctgatcttccgccgagcgccg
cacgtggacatggttgtcggaaccgggcagctcgccgaggtgccgcggatggtggccgag
gcccgcgaacagcgggggcgggcgctggcggtcagcctggaccgtcgcgacggcacccgg
actgaagtcgccggcagttttctgagctacgacccgctccgcgaaccgcagatgcgtccg
tcgccgtaccaggcgttcgtccggatcatgatcggttgcgacaagttctgcacatactgc
gtggtgccgacgacccgcggccccgagcagagccgttcgccgcgcgacatcgttcacgag
tcgcggattctcgccgagcagggggttaaggaaatcacgctgctcggccagacggtcaac
agctacaagttcaccgaagagggccgcgtccaccggctgtccgacctgctggcagcgatc
catgagatccccggcatcctgcggctgaagtttgtcacgaactacccgaaggacatgacg
accgagctgctgcagactctccgcgatctgccgaaatgcagccactatctgcacgtgccg
ctgcagtcgggttgcgacgagatgctgaagcggatgaagcggggctacaccgtcgagcac
taccgcgaaatgatgggccggatcaacgatatcctcccggacgccgccgtctccagcgac
ttcatcgtgggtttctgcggcgagacggaagaggctcatcagaagagcctggactccatc
cgcgagttccgcttcaagaacagctttattttcaagtacagtccgcggccggggacgaag
gcttatgacctgctccccgacgacgtccccgaagaggtcaagcgccggcggaacgcggaa
ctgctgacgctgcagaaccagatcagcgccgaggacaacgcgcgcttcatcggccggacg
gtggagattctggtcgaaggaccgagcaaggcggcgctgaaatcggagtttgccctggag
ggctgggtgccgccgattcccgacaatgtcgccacgcccacggagctgaccagcctggag
ctgccggtcgtcgccgagcccgatcgaccgcagattcagctcacgggtcggaccatgtgc
gaccggatcgtcgtgttcgacggcaatccgcggctcgctgggacgctggcgcggattcag
atcgaggactgctcgcccacgacgctgctgggctcgatcgagacccgtcagattcagcac
gggtcaaactcgctgctgccgatcctcgcgtaa
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