Planctellipticum variicoloris: SH412_000835
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Entry
SH412_000835 CDS
T09866
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pvar
Planctellipticum variicoloris
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvar03400
]
SH412_000835
Enzymes [BR:
pvar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SH412_000835
DNA repair and recombination proteins [BR:
pvar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SH412_000835
Prokaryotic type
SH412_000835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Methyltransf_3
Motif
Other DBs
NCBI-ProteinID:
WLD10758
LinkDB
All DBs
Position
complement(1066636..1068108)
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AA seq
490 aa
AA seq
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MKSSVPELRLRQANLRQTRSDGEYVLYWMTTARRTHGNYALQRAVDWCEALQKPLLVFEP
IGCRGRWNSDRFHAFVLQGMRDQQARLKEVGAGYLPSVERMPGAARVIFDELTRRACVVV
ADDFPCYFLPQMLEAGAARCPVRMEAVDGNGLFPMRGTDQVFPTAYAFRRFLQKNLPAHL
GQFPKFDPFRGRDLPRFAESLLPQSIRELSTVDDLLLRGDPAALAGIPIDHSVGPAAFPG
GEAAGRKVLRTFLESRLNRYAEHRNDPDQEAASGLSPYLHFGHIGAHEIFVAITQRENWT
PERLAAKASGSREGWWMMSPEAESFLDELITWRELGFNMCSHRSDFDQYGSLPEWARRTL
QEHAGDPRPWRYSADELEGAETHDELWNAAQRQLVREGRMHNYLRMLWGKKVLEWSASPE
EAVETLIHLNNKYAVDGRNPNSYSGIFWVFGRYDRAWGPERPIFGKIRYMSSENTARKLP
VKGYLDRYGP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatcgtccgttccggagctgcgactccgccaggccaatctgcgacagacgcgatcg
gacggcgaatacgtcctttactggatgacgacggcccgacggacgcacgggaactatgcg
ctgcagcgggcggtcgactggtgcgaggctctgcagaagccgctgctggtgttcgagccg
atcggctgccgcgggcgctggaactccgaccggtttcatgcgtttgtgctgcagggaatg
cgggatcagcaggcgcggctcaaggaggtcggtgcggggtatctgccgtctgttgaacga
atgcccggggcggcgcgagtcatcttcgatgagctgacgcggcgagcgtgcgtcgtcgtg
gcggacgactttccctgttactttctgccgcagatgctggaggccggggcggcccgttgt
ccggtccgcatggaagcggtcgacgggaatggtctgtttccgatgcgcgggacggaccag
gtgtttccgacggcctacgcgttccgtcggttcttgcagaagaatctgcccgcgcacctc
ggccagttcccaaagttcgatccattccgggggcgggacctgccccgattcgccgaatcc
ctcttgcctcagtcgattcgagaactgtcgaccgttgatgacttgctgctgaggggcgat
cccgccgccttggccggcattccgatcgatcactcggtcggtcctgcggcctttccagga
ggtgaagcggccgggcgaaaagtcctgcggacgtttctggagtcacgactgaatcggtac
gcggagcatcgaaacgatcccgatcaggaggcggcgagcgggttgtcgccctatctgcac
ttcgggcacatcggcgctcacgagattttcgtggcgatcacgcagcgcgagaactggact
cccgagcgtctggcagccaaagcgtcggggagccgcgagggctggtggatgatgagtccc
gaggccgaatcgttcctggacgaactgatcacctggcgcgagctgggtttcaacatgtgc
tcccaccgcagcgatttcgaccagtatggatcgctgcccgaatgggcgcggcggacattg
caggagcacgcgggcgatccacgaccgtggcgttattcggcggacgaactggaaggagcg
gaaactcacgacgagttgtggaacgccgcccagcgacagctcgtgcgagaaggtcgaatg
cacaactacctgcggatgctgtgggggaaaaaggtgctcgaatggtcggcctcgccggaa
gaggcggtcgagacgctgattcacctcaacaacaagtacgccgtcgacggtcggaatccg
aactcatactccgggatcttctgggtcttcgggcgctacgatcgggcctgggggccggaa
cgtccgattttcggcaaaatccgctacatgagttcggagaacaccgcccggaagctccct
gtaaagggctacctggatcgctacggaccttga
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