Planctellipticum variicoloris: SH412_000898
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Entry
SH412_000898 CDS
T09866
Name
(GenBank) SDR family NAD(P)-dependent oxidoreductase
Organism
pvar
Planctellipticum variicoloris
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Ketoacyl-synt_C
Acyl_transf_1
PP-binding
KR
PS-DH
adh_short
KAsynt_C_assoc
adh_short_C2
Thiolase_N
PKS_DH_N
CATRA-N
Motif
Other DBs
NCBI-ProteinID:
WLD10820
LinkDB
All DBs
Position
1131659..1139077
Genome browser
AA seq
2472 aa
AA seq
DB search
MSDHATPSGRTADMPPLAIVGASCLFPQAQGLDEFWANIRRGVDCISEVPASHWRPEDYF
DEDPKRPDMTYARRGGFLAPVPFDPLEYGISPNNLEAIDTAQLLSLVAAKRALEDAGYGA
GRKFDRSRVGCILGVTGTLEMVIPLGARLGHPRWRQALLGAGVPEEVAADVIERIGESYV
PWQENSFPGLLGNVVAGRIANRLDLHGTNCVVDAACASSLSAMHLAALELASGRSDMVLT
GGVDTFNDIFMYMCFSKTPALSPTGDAKPFSDRADGTILGEGVGLLVLKRLADAERDGDR
VYAVIRGIGTSSDGAGNAVYAPKAEGQIRCLQDAYRVAGVSPDTIELVEAHGTGTKVGDA
TEVTGLTEVYRSSGRDGAWCAVGSIKSQIGHTKAAAGVAGVLKAMLALQHRVLPPTIKVD
RPAAGLESEQTPFYVNTLPRPWIARKEHPRRAAVSAFGFGGSNFHCVLEEAPYAAAETDF
DGDVQIAAFSAADVVGLRVQLQPWSDLSDWAEVRRRCGASRAAFRSEHPQRLLLVLERGK
TPAGQVVRTAVSQLEKANGPASWATPDGAYFGSGPRAGKLGFLFPGQGSQTVGMLRDLAC
TFPAMQEVLAEADEAYATWAEPKNARQRLSDLVYPPPAFGDERLAAQEAALRATQVAQPA
IGAVSLGVLAVLQQFGIKPEVVAGHSYGELTALCASRRFVPQALYRLSMLRGRLMAEAQE
VDGGMLAVGASLSQVEAAIQEAAVDLVIANRNSPNQVVLSGRLPEIERASELFQRRNIRG
RKLQVSAAFHSPLMVKAKNRFRPVLDEVDFAQPEVPVYANSTAVEYPRDPAAARDLLAGQ
LAEPVQFVRQIENMYAAGVRIFVEVGPGAVLTGLVGSILSGRDFRAVAVDATQGRRGGMV
DLAHALAQLGASGYGVTLGTWDPSGENFRAPFEETGRPRMRVPLTGANYVKPRTPRPARA
VPATSIEPKPTAVLESALPTARTQPTPQKSELLPAAMPVPEAVQQIVDSAKADLPKVPAV
VVPVPARTAANAKPSVSPVLDLLQKMQAETARLHQQFLEGQSAALQTLERLLTGTTAPAP
LAASAPVPTMTVAPPVETARPVAAELDVVAAPVAAAVIVREPEAQVVAPTAPVAPPAVET
APSALGSILLDVVAAKTGYPAEMLSLEMSLDHDLGIDSIKRVEVLSALQERVPSLPAVKP
EQLGSLHTLADVVTLLDEQSTAAEVVTAPAAAPVVPTAIATEPSPLGALLLDVVATKTGY
PAEMLSLEMSLDHDLGIDSIKRVEILSALQERVPSLPAVQPEQLGSLHTLQDVISLLDQA
SPVQVSAVAVVSTPAPVASATAPTALSSGLGPLLLEVVAAKTGYPAEMLSLEMSLDHDLG
IDSIKRVEILSALQERVPSLPAVQPEQLGSLHTLQDVIALLDQESPAQTSVVTAVVSTPS
PVAPATAPMTPSPGLGPLLLEVVAAKTGYPAEMLSLEMSLDHDLGIDSIKRVEILSALQE
RVPSLPAVQPEQLGSLHTLQDVIVLLDQSVSVQSQAVIAPPPAPLVAAPSSLGPLLLEVV
AVKTGYPAEMLSLEMSLDHDLGIDSIKRVEILSALQERVPSLPAVQPEQLGSLHTLQDVI
ALLDQGQSAPASTSAPTRGRQPDLTRLQSIQRCIVRPVRVAELGGRVKYEFPAGCEVLVT
DDGTELSLRLTEELAARGMKPRLIGWEAVLVDGAASPAGLLLVAPPQGTTEDKLWHAIRL
AQAVGPKLRAAAATRPAFIAAVTRLDGVLGFGEAPRLLNPPSGGLAGLIKTLRHEWPELT
TKTIDVSSGFVQLRDAARLVVEELSWRGPYEVGVTPTDVWTLAVEEAPLVEAGPNLLQPG
DLVVVTGGARGVTAAAAIAVAETARPFLVVLGRSAEPQAEPDWLAPLLTEAEIKQHLFRQ
AVPGTSPRDIQQQYQRLMAEREVRQNLAALREQATGVEYHAIDVRDAVAVRGLLQQIQRT
RGPIRGVIHGAGVLADQRIEQKTREQFADVFQTKVQGLFSVLGAVDARELKALVLFSSFT
GRYGRTGQVDYAMANEVLNKFGQQFRREHPHCRVAAFNWGPWDGGMVTPGLKQLFASEGV
GLIPRSAGAELVAAELATPADGPAEVVVLGRSGETGSRGPVLLGVAGWQEGRPMTATPLP
HGTPSPKIESKPAAKIVVPVIAPAPAAGYQTAFEREIDLHRLPCLSSHVLGGKAVVPMVL
VLEWLGHGALHRNPGLEFVGVHELRIFKGLKLAFGEKVQIRVQTGRSVRDGELFRVPVQL
VSLVGDRSVLHAAATVLLAVKLPAGETPRLQPVAGPRTDAVGLYGTQLFHGLAFQGLTSV
DGCSPEGIAVRSRTAPQPDQWIRQPQRGAWLADPLVLDAALQALIVWSWQTTGNPCLPSG
CAEYRQFRRGFAPGEYRVVCQITQRSDHLVRADVEFLAADGSLVARFQGVESVIDALLKD
SFSRNSLEAPVT
NT seq
7419 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccacgcgacaccgtcgggcagaaccgcagacatgccgccgctggcgatcgtc
ggcgcgagctgcctgttcccgcaggcgcaggggctggacgagttctgggcgaacatccgc
cgcggcgtcgactgcatcagcgaagtgcctgcctcccactggcgaccggaggactatttt
gatgaagacccgaagcgtccggacatgacctatgcccggcgcggcggttttctggcgccc
gtgccattcgatccgctggagtacggcatctcgcccaacaacctggaggcgatcgatacc
gcccagctcttgagcctggtggcggcgaaacgcgcgctggaggacgcgggttacggggcc
ggacgcaagttcgatcgctcgcgcgtcggctgcattctgggggtgaccggcacgctggag
atggtgatcccgctgggagctcggctcgggcatccgaggtggcgacaggcgctgctcggt
gccggcgttccggaggaggtcgcggccgatgtcatcgagcggatcggcgagtcgtacgtg
ccgtggcaggaaaactcgtttccgggattgctcggcaacgtcgtggcggggcggatcgcg
aatcgcctggatctgcacggaacaaactgcgtcgtggatgcggcgtgcgccagttccctc
agcgcgatgcacctggcggccttggagctggcctcggggcgttcggacatggtcctgacg
ggcggcgtcgacacgttcaacgacatcttcatgtacatgtgcttcagcaaaacgccggcc
ctttcgccgaccggcgacgcgaagccgttttcggatcgcgcggacgggacgatccttggt
gaaggggtgggcctgctggtgctgaagcggctggcggatgccgagcgagatggagaccgg
gtttacgctgtgattcgcggcatcggcacgtccagcgacggcgccggcaacgcggtttat
gcgccgaaggccgaggggcagattcgctgcctgcaggatgcctatcgggttgctggtgtc
tcgcccgatacgatcgaactggtcgaagctcacggaaccgggaccaaggtcggcgacgcc
actgaagtaaccgggctgactgaagtctatcggtcaagtggtcgcgatggggcctggtgc
gccgttggttcgatcaagtcgcagatcggccacacgaaagccgcagcaggcgtcgctggc
gtgttgaaagcgatgctcgcgctgcagcatcgggtcctgccgccgacgatcaaggtcgac
cggccggcggcgggattggagtccgaacagacgccgttctacgtcaacacgctgccccgt
ccctggatcgcccggaaagagcatccgcggcgggcggccgtgagcgcctttggctttggc
ggcagcaattttcactgcgtgctggaagaggctccgtacgccgcggcagaaacggacttc
gacggtgacgttcaaatcgctgcattctcggcggcggacgtggtcgggttgcgggtgcag
ttgcagccctggtcggacctgtccgattgggcggaagtccgccgtcgctgcggggcgagc
cgggcggcgttccggtcggagcatccgcagcggctgctcctcgtgctggaacggggcaaa
actccggcagggcaggtcgtgcggactgctgtgagtcagcttgagaaggcgaatggtccg
gcaagctgggcgacgccggatggtgcgtacttcggttctgggcctcgcgccgggaagttg
ggctttctgtttccggggcagggctcgcagacggtggggatgctccgcgatctggcgtgc
accttcccggccatgcaggaggtcctggccgaggctgacgaggcatacgcaacctgggcc
gagccgaaaaatgcccggcaacggctgagtgatctggtttatccgccgcccgccttcggg
gacgaacggctcgccgcgcaggaagcggcgttgcgggcgacccaggtggcccagccggcc
atcggggcggtgagcctcggtgtactggcggtcctgcagcagttcggcatcaagcccgaa
gtcgtcgccgggcacagctatggcgagctcacggcgctatgtgcctcgcgccgttttgtg
ccgcaggcgctctaccggctgtcgatgctccgcggacgattgatggccgaggctcaggaa
gtcgacggcggcatgctggccgtcggagcttcgctgagccaggtggaggccgccattcag
gaagccgccgtcgatctggtcatcgccaaccgcaacagcccgaatcaggtggtcctttcc
ggacgcttgccggagatcgagcgggcgtcggaactgtttcagcggcggaatatccgcggt
cgcaagctgcaggtctcggccgcgttccacagcccgctgatggtcaaggccaagaaccgc
ttccgaccggtcctggacgaggtcgatttcgcccagcccgaagtgccggtctacgccaac
agcacggcggtggagtatccgcgcgatcccgccgcggcccgcgatctgctcgccgggcag
ctcgcggaaccggtgcagttcgtacggcagatcgagaacatgtacgccgccggcgtgcgg
atcttcgtcgaagtcggccccggcgccgtgctgaccggcctggtcgggtcgatcctgtcg
ggacgcgattttcgggcggtcgccgtcgatgcgacgcaaggtcgtcgcggcggcatggtc
gatctggcccatgcactggctcagctcggggcgtcgggttatggagtgacacttggaaca
tgggatcccagcggggagaatttccgggcgcccttcgaggaaaccggtcggccgcggatg
cgcgtgccgttgaccggagccaactatgtgaaaccccggacgccacggcccgctcgtgca
gtcccggcgacgtcgatcgagccgaagccgaccgcggtcctggagtcggctctcccaaca
gcaaggacacagccgacaccacagaagtcggaactattgcccgccgccatgcctgtcccc
gaagccgtacagcaaatcgtggattccgcgaaggcagacctgccgaaagtgcccgccgtg
gttgttcccgttcctgcacggaccgccgccaatgcgaaaccctccgtttcgcctgtgctg
gatctgctgcagaaaatgcaggccgagactgctcggctgcatcagcagtttttggaaggt
cagtcggccgcactgcagacactcgaacggctgctgaccggaacaacggcccccgcaccg
ctcgcggcgtcagcaccagtcccgacgatgactgttgcaccgccggtggaaactgcgcgt
ccggttgccgccgaacttgacgttgtggcggcgccggtcgcggcggccgttattgttcgc
gaacccgaggctcaggttgtcgcgccgacagcgccggtcgctccgccggctgtcgagact
gctccttcggcgctcggctcaatcctgctggacgtcgtcgcggcgaaaaccggctacccg
gcggaaatgctgtcgctggagatgagtctcgatcacgacctggggatcgactcgatcaaa
cgggttgaggttctgtcggctctgcaggagcgcgtccccagtctgcccgcggtgaaaccc
gaacagctcggttcgctccacacacttgcagacgtcgtgacgcttctggacgagcaatca
acggctgctgaagtcgtcacggctccggcggctgcacccgtcgttccgacagcaatcgcg
actgaaccttcaccgctcggcgccctgctgctggacgtcgtggcgacgaaaaccggctac
ccggcggaaatgttgtcgctggagatgagtctcgatcacgatctcgggatcgactccatc
aagcgcgtcgaaattctctccgcgctgcaggaacgggtgccgtcgctgccggctgtgcag
cccgaacagctcggttcactgcatacgctgcaggacgtgatctcgctgctggatcaggcc
tcgccggttcaagtttccgccgtcgccgtcgtatcgacgcccgcgcctgtcgcgtcggcg
actgcgccgacagctctgtcatccggacttggcccgctgctgctggaagtcgtcgcggcg
aaaaccggctacccggccgagatgctgtcgctggaaatgagcctcgaccacgatctgggg
atcgactcgatcaaacgcgtcgaaatcctctccgcgctgcaggaacgcgtgccctcgctg
cccgcggttcagccggaacagctcggttcgctgcacactttgcaggacgtgatcgcgctg
ctggatcaggaatcgccggctcaaacgtccgtcgtaactgccgtcgtatcgactccctcg
cctgtcgcaccggcgactgcgccgatgactccgtcacccggtcttgggccgttgctgctg
gaagtcgtcgcggcgaagaccggctacccggctgagatgttgtcgctggaaatgagcctc
gatcacgatctggggatcgactcgatcaagcgcgtcgaaattctttccgcgctgcaggaa
cgcgttccgtcgctgccggccgtgcagccggaacaacttggctcgttgcatacgctgcag
gatgtgatcgtgctgctcgatcagtccgtttccgttcaaagtcaggctgtcattgcaccg
ccgcccgctccgctggtcgccgctccctccagcctgggcccgctgctgctggaagttgtc
gctgtaaagaccgggtatccggcggagatgttgtcgctggagatgagcctcgatcacgat
ctgggcatcgactccatcaagcgcgtcgaaatcctctccgcgctgcaggaacgcgtcccc
tcgctgcccgcggttcaaccggaacagcttggctcgctgcatacgctgcaggacgtgatc
gcgctgctcgatcagggacagtctgcgcccgcatcgacttccgcaccgacccggggacgt
cagcctgatctgacgcgactgcagtccattcagcgctgcatcgtccgtccagtccgcgtc
gcagaacttggcggccgggtgaagtacgagtttcccgccggctgcgaagttctggtcacc
gacgatggaaccgaactgtcgctgcgattgaccgaagaactcgccgcccgcggaatgaag
ccccgactgatcggctgggaggccgttcttgtggacggggccgcgtcgccggccggtctg
ctgctggtcgctcccccgcaggggaccactgaagacaagttgtggcacgcgatccggctg
gcgcaagcggtcggcccgaaactgagggcggcggccgcgacacgaccggcattcatcgcc
gccgtgacccggctcgacggcgtcctgggattcggcgaagcgccccggctcctcaacccg
cccagcggcgggctggccgggctgatcaagactctccggcatgaatggcccgaactgacg
acgaagaccattgacgtctccagcggcttcgtacagctccgggacgcggcccggctggtc
gtcgaagaactgagctggcgcggtccctacgaagtcggcgtcacgccgactgacgtctgg
acccttgccgtcgaagaagctccgctggtcgaagctggaccgaatctcctgcaaccgggc
gatctggtcgtcgtcaccggcggagcgcgcggagtcacggcagcggcagccatagccgtc
gcagaaactgctcggccatttctggtcgtgctgggccgcagcgccgaacctcaggcggag
cccgactggctcgcgccgctgctgactgaagccgagatcaagcagcacctgtttcgtcag
gctgtccccggaacctctccacgcgacattcagcagcagtaccagcgactgatggccgag
cgggaagtccggcagaatctggccgctctccgcgagcaggcgaccggcgtcgaataccac
gccatcgacgtgcgggacgccgtcgcggtccgcggactcctgcagcagattcagcggact
cgaggcccgattcgcggcgtcattcacggtgcgggcgttctggccgatcagcggatcgag
cagaagacccgcgagcagttcgccgacgtcttccagacgaaggtccagggactcttcagc
gtgctgggggctgtcgacgcccgggagctgaaagccctggtgctgttctcgtccttcacg
ggacgttacggacggaccggccaggtcgactatgcgatggccaacgaggtcctcaataag
ttcggccagcagtttcgccgggaacacccgcactgccgcgtggcggcgttcaactgggga
ccgtgggatggcggcatggtcacgcccggcctgaagcagctcttcgcgagcgaaggcgtc
gggctgatcccccggagtgccggagccgaactggtggcggccgaactggcgacgcctgcc
gacggtccggcggaagtggtggtcctcggccggtccggcgaaacgggttcccgcgggccg
gtcctgctgggagtggccggctggcaggagggacggccgatgacggcgacacctctgcct
cacgggactccatcccctaagatagagtcgaagcctgcggcaaagattgtcgttccggtg
atcgcgccggcaccggctgccgggtatcagaccgcgttcgaacgagagatcgatctccat
cggcttccctgcctgtcgtcgcacgtactgggagggaaagcggtcgtgccgatggtgctg
gttctggagtggctggggcacggcgcgctgcaccgcaatcccgggctcgaattcgtcggc
gttcacgagctgcggatcttcaaggggctcaagctggccttcggcgagaaggtccagatc
cgagtgcagaccggtcgctctgtccgcgacggcgaactgttccgcgtgccggtccaactg
gtaagtctcgtcggggatcggtcggttctgcatgcggccgcaaccgtcctgctggcggtc
aagctgccagccggcgaaacaccgcggctgcagccagtcgccggaccgcggactgacgca
gtcgggctctatggcacgcagctcttccacggtttggcgttccaggggctgacgagcgtc
gatggctgcagcccggagggtatcgctgtgcgcagccggacggctccacagcccgatcag
tggatccgacagccgcaacgaggcgcatggctcgccgatccgctggtgctggatgcggcg
ctgcaggcgctgatcgtctggagctggcagacgacggggaatccctgtctgccgagcggc
tgtgctgagtatcggcagttccgccgcggctttgcgccgggcgaataccgcgtcgtctgc
cagatcacgcagcggagcgatcacctggtgcgggccgacgtggagttcctcgccgcggac
ggatcgctcgtcgcccgcttccagggcgtggaaagcgtgatcgacgccctgctcaaagac
tcgttctcccggaattcgctggaagccccggttacctga
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integrated database retrieval system
