Planctellipticum variicoloris: SH412_000905
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Entry
SH412_000905 CDS
T09866
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar03030
DNA replication
pvar03430
Mismatch repair
pvar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SH412_000905 (dnaX)
03430 Mismatch repair
SH412_000905 (dnaX)
03440 Homologous recombination
SH412_000905 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvar03032
]
SH412_000905 (dnaX)
03400 DNA repair and recombination proteins [BR:
pvar03400
]
SH412_000905 (dnaX)
Enzymes [BR:
pvar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SH412_000905 (dnaX)
DNA replication proteins [BR:
pvar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SH412_000905 (dnaX)
DNA repair and recombination proteins [BR:
pvar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SH412_000905 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
RuvB_N
AAA_14
TIP49
AAA_30
AAA_18
AAA_16
ResIII
PIF1
DUF815
Glyco_tranf_2_5
Mg_chelatase
AAA_24
AAA_2
TsaE
Rad17
Motif
Other DBs
NCBI-ProteinID:
WLD10827
LinkDB
All DBs
Position
complement(1145219..1147015)
Genome browser
AA seq
598 aa
AA seq
DB search
MDTQYTALARRFRPQTFSEVVGQERIAQTLRNAILENRVAHAYLFTGARGVGKTSMARIF
AKALNCPNTKDGVPCNECEICRGISAGNDVDVSEIDGASNRGIDDIRSLRANVNVRSMRS
KYKVYIIDEVHMLTKEAFNALLKTLEEPPPLVKFVFCTTEPNKVPDTILSRCQRFDFGTI
STDNIEIRLSQLAEAEGFTVDQEALELVARRAAGSMRDSQSLFDQLLAFGAQHITAADVH
RLLGTAPDQRLIDLIEAMIDRRRDAALSQFQVALNDGVQLEAFTDQLLNYFRDLMVAACG
AEGVQLLSVGRDCLPKLQEQSRRWGLENVVAALQIFADTKGRMQRVTYGRALAELALVRL
SLLADMERLDDLLSQLKAGNAVVASGTARPTSAPPPRLAASTSPVPAPSLPAQKKNERLT
PPPAEVASGADSPVTGSRDPAPIEAAAPPPVIAFQPGLEAELHRLMLSRLTDMTGTHLAK
VVSTAISGPNRLDFSFSASYDIGRKACERPEVQARLESLVKELTGQDVRIQFRTVVTEAP
EAKPQPAQPTNSRRKVVESPEDPLVQEVAKTFGIERWLRQEVLAEVVEAPAGGDLPEE
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggatacgcaatacaccgcactcgctcgacgcttccgcccgcagacgttttcggaagtc
gtcggccaggagcgcatcgctcagacgctgcgcaacgccatcctcgaaaaccgagtcgcc
cacgcctatctcttcaccggggcgcggggcgtcggcaagacgtcgatggcccggatattc
gcaaaggccctgaactgtccaaacaccaaagacggcgtcccctgcaacgagtgcgagatc
tgccggggcatttccgcgggcaacgacgttgacgtgtccgagatcgacggcgcctcgaat
cgcggcatcgacgacatccgctcgctgcgggcgaacgtcaacgtccgctcgatgcggtcg
aagtacaaagtctacattatcgacgaagttcacatgctgacgaaggaggcgttcaacgcc
ctcctgaagacgctggaagaaccgccgccgctcgtcaaattcgtcttctgcacgaccgag
ccgaataaagtccccgacacgattctgtcccgctgccagcggttcgatttcggaacgatt
tctaccgacaacattgaaattcgcctgtcgcagctcgctgaggcagaaggcttcacggtc
gaccaggaggccctggagctggttgcccggcgggcggccggttcaatgcgtgacagccag
tccctgttcgaccagctcctggccttcggcgcgcagcacatcactgcagccgacgtccat
cgcctgctggggacggcgcccgaccagcggttgattgatctgatcgaggcgatgatcgac
cggcggcgcgatgcggccttgtcacaatttcaagtcgcgttgaatgatggggtgcaactg
gaggctttcaccgaccagttgttgaattatttccgggatctgatggtcgctgcctgtgga
gccgagggcgttcagcttttgagcgtggggcgggattgcctgccgaagctccaggaacag
tcccggcgctggggtctggagaacgtggtagcggcgttgcagatcttcgccgataccaag
ggccggatgcagcgggtgacatacggtcgggcgctcgccgagctggctctcgtccggctg
tcgctgctggccgatatggagcgactcgacgaccttctgtcgcaactcaaggcgggcaat
gccgttgtcgccagcggaaccgcccgtccgacgagtgctccgccacctcggctggcggcc
tcgacgagccctgttccggccccaagcctgccagcgcaaaaaaaaaatgagcgactgacg
ccccctccggcggaggtggcttcaggtgcggattcgccggtgactgggagtcgagatccg
gctccaatcgaggctgcggcgccccccccggtgatcgcatttcagccgggacttgaggcg
gaactgcaccgcctcatgttgtcccgcttgaccgacatgactgggactcacctggcgaaa
gtcgtgtcaactgcaatttccggaccaaatcgactggatttctcattttctgcgagctat
gatatcggacggaaggcgtgcgagcggccggaagtccaagcccggctagagagtttggtc
aaagagctgactggccaggacgtacggattcagttccgtaccgtggtcaccgaagctcca
gaagccaaacctcagcccgctcagccgacgaacagtcgacgcaaagtggtggagtcaccc
gaagacccgctggtccaggaagttgcgaaaaccttcgggatcgagcgctggctccggcag
gaggttctggccgaggtggtcgaggccccggctggcggagacctgcccgaggaatag
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