Planctellipticum variicoloris: SH412_001173
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Entry
SH412_001173 CDS
T09866
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SH412_001173
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvar02000
]
SH412_001173
Transporters [BR:
pvar02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SH412_001173
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WLD11080
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All DBs
Position
1492429..1494876
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AA seq
815 aa
AA seq
DB search
MPRFIASAWRAAGLTCVLLAGCTTSSPPAADSAAKSATPAEGASADPSGKVADSPAKIAA
VDAAYPDVPVIPIMTEVDGIEIPRLTTGSQDLQLTGPIQADVGNEHAKAKPSEPVRGDAI
RIRFNSEPKTLNPIVETSAVQTYIGQYVQESLLWQNMETFEFEPHLAESWVAEDSVKLSA
DYPGKERRIARTGETPAASFEFDYTEPASERDEPAKVEVLTSDPAGKPLGGVWVGVFPKG
KILGAPLNGYHLWSDPQGKVTLSAFPTGTYVVKTGAEIYGKAKKGDDGSLVVTAATEENP
LREELKSSGDAELTLKAGEWSDIQEQTYYTYRLRQDVKWSDGTPYTTRDLEFAYASLKNP
TVDGESIRTYYSDIIECKGLTPHVVRMRYRQQYFKALEVTAQIGLYTPPFHFFAKRVKDS
KNVELTLEPLTEAEEAAQGKWSVHGKEFGRFFNTDSEYNLKPLGTGPYMVGRWVRDQLVE
LERNPIYWNQQRPGYLDKIIVKFIPDNVTAMQALQAGEIDFFWYMTPEQYFEDLKGPPDW
FKNKYVKADWFTPMFNYIGWNMLNPEFQDRRVRIALSMLFDKQDFLEKKLYNAGVIVSGS
QYYFGPGYDHSVAPLDYSPDTARELLSDAGWVDTDNDGLLDKDGKKLSLTIYIPPGNPVV
QQRIELYQKSLRTVGIELDVRLQEWASFIDRIRSKKFDICTLSWVTPVESDPYQIWHGSQ
AGADKRGSNHVSFNNAQANELIEMLRVTLDDKKRQKIHHAFHRLIDAEQPYMFMYCIKDF
GAYHQRFRGVKWYRLRPGFDLTEWYVPKDEQLIKE
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgccacgattcatcgcgagtgcctggcgggccgccggcctgacctgtgttctgctggcc
ggctgcacgacgtcgtctccgccggccgccgacagcgcagcgaagtccgcgactcccgca
gagggggcatcggccgatccatctggcaaggtcgcggattcgccggcaaagatcgccgcg
gttgacgccgcgtatcccgacgtccccgtcattccgatcatgaccgaagtcgacggaatc
gaaattccgcggctgacgacgggatcccaggacctgcagctcaccggtccgatccaggcc
gacgtcggcaacgagcatgcaaaagccaaaccgtccgagcctgtccgcggcgacgcgatc
cgcatccgtttcaactcggaaccgaagacactcaacccgatcgtcgagacgtccgccgtg
cagacctacatcggtcagtacgtgcaggagtctctgctctggcagaacatggagaccttc
gaatttgagccccatcttgcagaatcctgggtcgccgaagattccgtgaagctgtcggcc
gactatcccggcaaggagcgccggatcgcccggacaggcgagacccccgcggcgagtttc
gaattcgactataccgaaccggccagcgagagggatgaacccgcgaaggtcgaagtcctg
accagcgaccctgccggcaaaccgctcggaggagtctgggtcggcgtgtttcctaagggc
aagattctcggcgccccgctcaacggatatcacctgtggagcgatccccagggcaaagtc
acgttgagcgcatttccgaccgggacgtacgtcgtcaagaccggcgccgaaatctacggt
aaagcgaagaaaggggacgacggttcgctggtcgtgacggcggccacggaagaaaacccg
ctccgcgaagaattgaagtcttcgggggacgccgagctgacgctgaaggcgggggaatgg
agcgatattcaggaacagacgtattacacgtaccggctgcggcaggacgtcaagtggtct
gacgggactccgtatacgaccagggatctggaattcgcctacgcctccctcaagaatccg
acggttgatggcgagtcgatccgcacttactactccgacattatcgagtgcaaagggctc
acgcctcacgtggtccgcatgcgctaccgtcagcagtacttcaaagccctggaagtgacc
gcgcagatcgggctttatactcccccgttccacttcttcgccaaacgggtgaaggactcg
aagaacgtcgagctgacgcttgagccgctgaccgaagcggaagaagccgcccaggggaag
tggagcgttcacggcaaagagttcggccggttcttcaacaccgacagcgaatacaacctg
aaacccttgggaaccggtccgtacatggttggtcgctgggtccgggatcagctcgtcgag
ctggagcgaaacccgatctactggaatcagcagcgtccgggctatctcgacaagatcatc
gtcaagttcatccccgataacgtgacggcgatgcaggctctccaggccggcgaaatcgac
tttttctggtatatgacgccggagcagtatttcgaagacctcaaaggccctcccgactgg
ttcaagaacaagtacgtcaaagccgactggttcacgccgatgttcaactacatcggctgg
aacatgctcaacccggagttccaggatcggcgggtccggatcgcactgtcgatgctgttc
gacaagcaggacttcctggaaaagaaactctacaatgcaggcgtgatcgtttctggatcg
cagtattacttcggcccgggctacgaccactcggtcgccccgctcgattactcgcccgat
accgcccgggagcttctctccgatgccggctgggtcgacaccgacaacgacggcctgctc
gacaaagacggcaaaaagctttcgctgacgatttatattccgccgggcaatccggtggtt
cagcagcggatagagctgtaccagaagagcctgcgaaccgtcggcatcgaactcgacgtg
cggctgcaggaatgggcgtcgttcattgaccgcatccgctcgaagaagttcgacatctgc
actctgagctgggtgacgcccgtcgagagcgacccgtatcagatctggcacggatcgcag
gccggcgcggacaagcgcggcagcaatcacgtttcgttcaacaacgctcaggccaacgag
ttgatcgagatgttgcgcgtcacgctcgacgacaagaagcggcagaagattcatcacgcg
tttcaccggctgattgatgccgagcagccttacatgttcatgtattgcatcaaagacttc
ggcgcctaccaccagcgattccgcggggtgaagtggtatcgcctgcgtccgggtttcgat
ctcaccgaatggtacgtccccaaagacgagcaactgatcaaggaatga
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