Planctellipticum variicoloris: SH412_001292
Help
Entry
SH412_001292 CDS
T09866
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar00860
Porphyrin metabolism
pvar01100
Metabolic pathways
pvar01110
Biosynthesis of secondary metabolites
pvar01120
Microbial metabolism in diverse environments
pvar01240
Biosynthesis of cofactors
Module
pvar_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SH412_001292 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvar04147
]
SH412_001292 (hemB)
Enzymes [BR:
pvar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
SH412_001292 (hemB)
Exosome [BR:
pvar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SH412_001292 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
WLD11196
LinkDB
All DBs
Position
1640235..1641257
Genome browser
AA seq
340 aa
AA seq
DB search
MSGFRVPSNPGQYPTTRLRRLRQSDWSRRLVREHQLSVNDLIWPVFVQEGQGVRTSIGSM
PGVERLSVDLFAAAVAEAAELGIPAVAIFPVTDPARKSEDGHEALNPDNLMCRAVRAVRD
AKVEIGVICDVALDPYTTHGQDGLVRDGQVINDETVAVLQQQAIVQAQAGCDVIAPSDMM
DGRIGAIRQALDGAGFAHVQILSYAAKYASAYYGPFRDAVGSAANLGTGDKRTYQMDPAN
GDESLREVALDIAEGADMVMVKPGLPYLDIVYRVKEAFGLPTFAYQVSGEYAMIAAAAQN
GWIDRKKVMLESLLAFKRAGADGVLTYFAVEVAKLLKAGD
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtccggctttcgcgtgccatcaaatccggggcagtatccgaccacccgcctgcgaagg
ctgcggcagtcggactggtcgcgacggctggtccgcgagcatcagttgtcggttaacgat
ctcatctggccggtcttcgtccaggaaggccagggcgtccggacttcaatcggctcgatg
cccggcgtcgaacggctgtcggtcgatttgtttgcggccgccgtggcggaagctgccgaa
ctcggcattcccgcggtcgcgattttcccggtcaccgatccggcccgaaaatccgaggat
ggccatgaggctctgaacccggacaacctgatgtgccgggccgtgcgtgcggttcgtgat
gcgaaggttgaaatcggggtcatctgcgacgtcgcgctcgatccctacacaacgcacggc
caggacggtctggtgcgggatggtcaagtcatcaatgacgagaccgtggcggtcctgcaa
caacaggcgatcgtccaggcgcaggccgggtgcgacgtcatcgccccgtcggacatgatg
gacggtcggatcggggccattcgccaggctctggatggcgctggtttcgcgcacgtgcag
atcctctcttatgccgccaaatacgcctcggcctactacggtccgttccgcgacgcggtc
ggctcggccgccaatctgggaactggcgacaagcggacttaccagatggatccggcgaac
ggcgacgagtcgctgcgcgaagtggcgctcgatatcgccgagggggcggacatggtgatg
gtcaaaccggggctgccgtacctcgacatcgtctatcgggtcaaggaggccttcggcctg
ccgacgttcgcgtaccaggtcagcggcgagtacgcgatgatcgccgccgccgcgcagaac
ggctggatcgaccggaagaaagtcatgctggaaagcctgctcgcgttcaagcgggccggc
gcggacggcgtgctgacgtacttcgcggtcgaggtggcgaagctgctgaaggcgggggac
tga
DBGET
integrated database retrieval system
