Planctellipticum variicoloris: SH412_001552
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Entry
SH412_001552 CDS
T09866
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SH412_001552
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvar02000
]
SH412_001552
Transporters [BR:
pvar02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SH412_001552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_16
SMC_N
AAA_22
Zeta_toxin
DUF87
AAA_23
DO-GTPase2
AAA
AAA_30
AAA_29
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
WLD11449
LinkDB
All DBs
Position
1967608..1969467
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AA seq
619 aa
AA seq
DB search
MPSAADESSQLPSNWALIRRMIGLGWIYRVACLRVIVLQSLLVLLALAGLSLTGYGIDVL
RHRLTPGDAVPTGPLGWSPPPEWSAFATISVVAGTVLALACFNALLKFVAAVATADLAQR
IVVRLRTDVYDKLQRLSFRFFDDRDSSSIINRVAGDVQAVRSFIDGVLIKTLTVGISLAV
YLAYMLSVHVPLTVACLCCSPLLWWGAIGFARTVRPLYRRSSELGDNLILTLSESVQGIQ
VIKGFAREPAEQARFEAANRALRDQKYDIFRRLSVYQPLMGFLTQINLLVLIGYGGWLVV
QGQLPLGAGLFVFANLLQEFAAQVGQMINIANSVQTSLTGAQRVFEVLDAPVEIASLPQA
RRLERSQGEIAFEHVSFAYVPGEPVLLDVSFEIRAGECLGIVGETGAGKTTLLSLIARFY
DPDAGRVLIDGVDLRELDLQDLRRNIGLVFQESFLFSNTVAANIAFGLPDSDRERIERAA
RLASAHDFIQDLPENYESLVGEHGSNLSGGQRQRLAIARALLLDPPILLFDDATAAVDAE
TEHEIQQALETSLGGRTTLLVSGRVSVLKHADRILVLERGRIVELGSHGELMARDGAYAR
LARMQVVEDEPCGAAEGPA
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
gtgcccagcgccgctgacgagtcttctcaactgccgtcgaactgggcactcatccgccgg
atgatcggcctgggctggatctatcgcgtcgcctgcctccgcgtcatcgtcctgcagagc
ctgctggtcctgctggccctcgccggactgagcctcaccggctacggaatcgacgtcctg
aggcaccggctcacccccggcgacgccgttccgaccggtccgctcggctggtcgcctccg
cccgagtggtctgcgttcgccacaatttcagtcgtcgccggcaccgtcctggcgctggcg
tgtttcaatgccctgttgaaattcgtcgccgcagtcgccaccgccgacctcgcccagcgg
atcgtcgtccggctgcgaaccgacgtgtacgacaaactccagcgactcagttttcgcttc
ttcgacgaccgcgacagcagctcgatcatcaatcgcgtcgccggcgacgtgcaggccgtc
cgcagcttcatagacggcgtgctgatcaaaaccctcacggtcggcatctcgctggcggtc
tacctggcctacatgctgtcggtgcacgtcccgctgaccgtggcctgcctctgctgctct
cccctcctctggtggggggcgatcgggttcgcacgcacggtccgccccctctacagacgg
agcagcgaactcggcgacaacctgattctgaccctctccgagagcgtgcaggggatccag
gtcatcaagggcttcgcccgggagcctgccgaacaggcgcgcttcgaagccgccaaccgg
gccctccgcgatcagaagtacgacatcttccgccggctcagcgtctaccagcccctgatg
ggcttcctgacgcagatcaacctgctcgtcctgatcggctacggcggctggttggtcgtt
caaggacaacttccgctcggcgccgggctgttcgtcttcgccaacctgctgcaggaattc
gccgctcaggtcggccagatgatcaatatcgccaacagcgtgcagacgagcctgaccggc
gctcagcgggtcttcgaagtcctcgacgccccggtcgagatcgccagccttccgcaggcc
cggcggctggagcggtcgcagggggaaattgccttcgaacacgtctcgttcgcgtacgtt
ccgggagaaccggtgctgctggatgtgtcgttcgagatccgcgccggggaatgcctggga
attgtcggcgaaaccggcgccggcaagacgaccctcctgtcgctcatcgcccgcttctac
gatccggacgccggccgggtgctgatcgacggcgtcgacctccgcgaactcgatctgcag
gacctgcggcggaacattggcctcgtctttcaggagagcttcctgttcagcaacaccgtc
gctgcaaacatcgccttcggactgcccgactccgaccgcgaacggatcgaacgggcggcc
cggctcgcctcggcccacgatttcattcaggatctcccggaaaactacgaaagtctcgtc
ggagagcatggctccaacctctcgggagggcagcggcagcgtctggccatcgcgcgagcg
ctcctgctcgacccccccattctgctgttcgacgacgccacggccgccgtcgacgccgaa
accgaacacgagatccagcaggctctggagacgtcgctcggcggacggacgactctcctg
gtgtcgggccgggtcagcgtgctgaagcacgccgaccggattctcgtcctcgagcggggc
cggatcgtcgaactcgggtcgcacggcgagctcatggcccgcgatggcgcctacgcccgg
ctcgccagaatgcaggtcgtcgaggacgaaccctgcggtgccgcggaaggacccgcatga
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