Planctellipticum variicoloris: SH412_001783
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Entry
SH412_001783 CDS
T09866
Name
(GenBank) efflux RND transporter permease subunit
KO
K15726
heavy metal efflux system protein
Organism
pvar
Planctellipticum variicoloris
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvar02000
]
SH412_001783
Transporters [BR:
pvar02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SH412_001783
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Sas-6_helical
Motif
Other DBs
NCBI-ProteinID:
WLD11674
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All DBs
Position
2288270..2291434
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AA seq
1054 aa
AA seq
DB search
MNWLLDFSLRHRLVVIALALVTLVLGTRTILSLPIDIFPNLTRPRVTVMTECPGLAPEEV
ETLVTFPLETAFNGATGVEAVRSQSGIGLSVIYVEFGWSTDIYIARQIVNERLATVSQQM
PAGVKPELAPISSIMGQIMMVGLTCKDETTSPLELRTLADWVIRPRLLTIPGVAQVITMG
GGRKQYQVRVNPDQLLAYDVTLREIEASLRESNENATGGYVTQGPLEYLVRSLGRIQSIE
DLEQTVVQSRPGRSVLLRDVATVQEGPQTKRGDSSVNGLPAVVLTIAKQPQGDTRLLSDQ
ITAALKDLEAALPPGVEIHDDVYQQRSFIDRGVDNVVEALRDGAILVLIVLFLFLLNFRT
TFITLTAIPLSIVMTGLVFYWCGLSINVMTLGGLAVAMGELVDDAIVDIENVFRRLGQNA
SLPSPRPVLEVVYSASLEVRSSIVFGTMLVILVFIPLFALSGIEGRLFVPLGIAYIVSIL
ASLLVSLTVTPVLGSLLLTGRNRSGHGDKDSPLLRLLKIAVSPVVRTSLHPFGLAVILTV
VLGTIGGSAVMFLRMGTDFLPSFDEGAAQVNIVMPPGSSLETSNRVSGMVDRAFLKHRAS
PEQPHGVVQSFIRRSGRAELDEHAEGVNVTEYIVTLNPDSGVSRTDTLAILRGELAEIPG
IEYEAEQPLAHLISHMLSGVSAQIAIKLYGDDLDVLRRKAQDIKGAITGIPGLAPPVVEP
QQLIPQLRIVLDREQLAAYGLTPGEVNEFIETALNGRVVSTVLEGQRTFDLQVRLEEAYR
TDFDQIHRLSIDLPSGGRIPLATVAKIEQGGGPNTISRENVRRRITVRGNATDRDLGSVV
ADIRRAVTEKVELPEGYFVEYGGQFEAQQEASRRILLLSLVSLAGVFLVLYTLFPSTRIV
LQIMFALPTAFVGGVIALWLTHQSLSIAALVGFISLGGIAARNGILLVAHYRHLMQEEGE
GFSAEMVVRGSLERLAPVLMTALTAGIGLLPLVLGGHQPGKEILYPVATVILGGLITSTL
CEYLVHPGLFYRFSGKSAAAMGQRTNQTLENQEA
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgaactggctgctcgacttttcgcttcggcatcgtctcgtagtgatcgccctcgccctg
gtcacgctcgtgctcgggacgcggacgatcctgtcgttgccgatcgacatctttccgaat
ctcacccggccgcgggtgacggtcatgaccgagtgtccggggctggcgcccgaagaggtc
gaaacgctggtcacgttcccgctggagacggcctttaacggtgcgaccggcgtcgaagcg
gtccgcagtcagtcgggtattggcctgtcggtgatctacgtcgaattcggctggtcaacc
gacatctacatcgcccggcagatcgtcaacgagcgcctggcgaccgtttcccagcagatg
cccgccggcgtcaaacccgaactggcgccgatcagctcgatcatgggccagatcatgatg
gtcggcctcacctgcaaagacgaaacgaccagccctctggaactgcggacgctcgccgac
tgggtcatccgcccgcgtctgttgacgattcctggcgtggctcaggtgatcacgatgggg
ggcgggcggaagcagtatcaggtccgcgtgaatcccgatcagcttcttgcctacgatgtg
acgctgcgcgagatcgaagcatcgctgcgggagagcaacgagaacgccaccggcggctac
gtgacccagggccccctcgaatatctggtgcgcagcctaggccgcattcagtcgatcgag
gatctggagcagaccgtcgttcaaagtcgaccgggccggtcggtgctgctgcgggacgtg
gcgacggttcaggaaggaccgcaaaccaaacgcggagacagttcggtcaacggtctgccg
gcggtcgtgctgacgatcgccaaacagccccagggtgacacgcgactcttgtcagaccag
atcaccgcggccctcaaggatctcgaagcggcgctcccgccgggggtggagatccacgac
gacgtctaccagcagcggtcgttcatcgaccgtggcgtcgacaatgtcgtcgaggcgctc
cgcgacggtgcgattctcgtcctgatcgtgctgtttctgtttctgctgaacttccggacc
accttcatcacgctgacggccataccgctctcgatcgtcatgaccggtctcgtgttctac
tggtgcggtctgagcatcaacgtcatgaccctcggcggtctcgccgtggcgatgggggaa
ctggtcgacgatgcgatcgtcgatatcgaaaacgtgttccgtcggctgggacagaacgcg
agtctgccatcgcccaggcccgtacttgaagtcgtctactcggcgagcctggaagtgcgc
agttcgattgtctttggaaccatgctggtcattctggtcttcattccgctgtttgccctg
tccggaatcgaggggcggctgtttgtcccgttgggcattgcgtacatcgtttccattctg
gcctcgctgctggtctcgctgaccgtgacgccggtactcggcagcctgctgctgacgggc
cggaatcgcagcggacatggcgataaggacagcccgctgctccgtcttctcaagatcgcc
gtgtctcccgtggttcggaccagtctgcacccgttcgggctggcggtcatcctgactgtc
gtgctggggacaattggcggcagcgccgtgatgtttctgcgcatggggacggacttcctg
ccctcctttgacgaaggggcggctcaagtcaacatcgtcatgccccccggatcgtcgctg
gagacctcgaatcgcgtcagcggcatggtggaccgggcgttcctgaagcatcgggcttcg
cccgaacaaccgcacggcgttgtccagagcttcatccgccggagtggcagggcggagctg
gatgagcatgccgagggggtcaacgtcacggagtatatcgtgacgctgaatcccgacagc
ggcgtctcgcggacggatacgctggccattctgcggggtgaactcgccgagattcccggc
atcgagtacgaagccgagcagccgctggcgcacctgatcagccacatgctctcgggggtt
tcggcgcagatcgccatcaagctctacggcgacgatctcgacgtcctccgccggaaagct
caggatatcaagggggcgatcactggcatccccggcctggcgccgccggtcgtggagccg
cagcagctcatcccgcaattgcggatcgtcctcgatcgcgagcaactggcggcgtatggg
ctcacgccgggcgaggtcaacgaattcattgagaccgcgcttaacggacgggtcgtgtcg
acggtgctcgaaggtcagcggacgttcgatctgcaagtgcgactggaggaagcctaccgc
accgacttcgaccagatccatcggctgtcgatcgacctgccttcgggaggtcggattccg
ctggcgacggtggcgaagattgagcagggaggggggccgaatacgatcagtcgcgaaaac
gtccgtcggcggatcacggtccgcgggaacgcgaccgaccgcgacctggggagcgtcgtc
gcggatatccgccgggcggtcacagaaaaggtggaattgcccgaaggttactttgtggaa
tacggcgggcagttcgaagcccagcaggaggcttcccgccggattctgctgctgagcctg
gtctcgctggcaggcgtgttcctggtgctctacacgctcttcccatcgacccggatcgtc
ctgcagatcatgttcgccttgcctaccgcgtttgtgggcggagtcatcgccttgtggctg
acgcaccagtcgctcagcattgcagccctggtgggattcatctcgctgggaggcatcgcc
gcccgcaacggcattctgctcgtcgcgcactaccggcatctgatgcaggaggagggagag
ggtttttcggcggaaatggtcgtccgcggcagcctggagcgcctcgcgccggtgctgatg
accgcgttgaccgcgggaatcggcctgctgccgctggtcctcggcggccatcagccgggg
aaggagattctttacccggtggcgaccgtgattctgggcggactgatcacgtccaccctc
tgcgagtacctcgtccacccaggcctgttttaccgcttcagcggcaagtccgcggctgcg
atggggcagcgcacgaaccagacgcttgagaatcaagaggcatga
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