Planctellipticum variicoloris: SH412_002144
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Entry
SH412_002144 CDS
T09866
Name
(GenBank) PAS domain S-box protein
Organism
pvar
Planctellipticum variicoloris
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_9
PAS_4
PAS
PAS_8
HATPase_c
GAF
PAS_11
GAF_2
HisKA
Diguanyl_cycl_sensor
GAF_3
HATPase_c_5
Motif
Other DBs
NCBI-ProteinID:
WLD12020
LinkDB
All DBs
Position
complement(2750261..2754655)
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AA seq
1464 aa
AA seq
DB search
MECKTCASSAPETARYCSQCGSLLPFGASGSDHSQLPFGFRSPPYFAQRILDAAPLAIVA
LDPSGRIQYINRFLEELSGRRLAEIAGRDWFDTFLPERDRVRIREIFRTAVTQAPTRGNR
NPIVTASGEERDIEWNDELLQDEQGRVAGLIAIGQDVTEQVRAERAARESEERFRKLMEH
STKVIALYDADTRILYQSPSVRDVLGYEPEEMIGRLAFEYCHPDDRPAIRERMPEILSTP
GAIGKVELRSRCKDGSYRWLELIATNRLHDPTIRAVVGSYRDISAQKAVEEILRLQEQAI
ALSLRPILFADGDGCLNSANRAFVRSWGYADTSDIVGRRLTEVCGPPAAVGEILDKLRGD
GNWIGELTGTRHDGTPFPIECTAVAIRDDNDRLKSLMISCADITERKRTQETLQLSERRF
RKLIENSADAIALYDAAGTILYRVPTATAMLGYRSDELIGQSAFDYCHPDDAPLAKGVLL
AVLERPDQPVRLELRCRTKSGSYRWVELVATNQLEEPAVRAIVGNYRDITDRKESEEREA
VRLAKLRRLSELSMRMAGEPPSVFTHVVQMIGELFGVKMVCLMVVENEDLAFQAIFANGR
ATVDHQRCALAGTACGLVASTGKLLIFDRVRERFPDSKIFQEHNIVTYCGFPAVDGKGCV
AAVVCLLHDHPREFAEEDQELLRLIGQRVATEVERTRIQTARQRAEAELRNSEERFRTLF
ESAPIPIVLTDLDGRYSAVNPAFESSTGFSADEVIAKTSVDIGLIAAETLEARAASAALR
SHGRVDNLEVLTRTRSGQLRNCLFSSRVVSLGEAPQVLSLAIDITERKQAEAELRTTKER
YELVIRGLNEGVWDLNLVTNELTPSERLLEMIGFDRGEISPDLNAWLDLVHPEDRSMVAE
QIRRHSARREPYSIRFRHRHKSGDYLWLHGRGQAVWNERGEVIQLAGSVADITSQVEAQQ
ALEASEERFRMLFEAAPFAVTVNGMDGRFTAVNPAFEQLSGYAASEVLGRIPLDLGMGTG
SVGVELVVDILERSGRLDYVETTTRTKGGRRRNVLFCCRLVTLGGKRQILSSSIDITDRK
RAEEALRTSEQRLAEAQRIAHVGNWHWEIQTDEIAWSDEVYRIFGMTPRSITPHYQTEFL
NLAHPEDRSAIIAAVRETLETGRPYVIEHRIRRADGTERIVRENGEVVRDEHGHTIGMKG
TVQDITERIAAESQLKLLRDEMAHVARLGMLGELAAGIAHELNQPLAAIANYAFAVESRL
ARQSEAGRRQAPESNRSIIRRISDQAERGGEIIRRLQAMIRNQPSQRSTVSISRLIDEVL
ALLAGDLRLAQIDVSVDAPESLPSVMVDPVQIQQVLFNLIRNSIESLRQQSENRRLGIRA
DLEPESMLRIRVRDSGAGVPADMQPRLFTPFATSKPKGLGLGLPISKRIIEFHGGEICCN
AAIDSGFEVCFSLPIADGESCSHA
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtaaaacgtgcgccagttcagcgcccgagacagctcggtattgcagtcagtgt
ggcagcctgctgccgttcggggcttccggatcggaccactcccagttgccgttcggtttc
cgttccccgccatatttcgcgcagcgaatactggatgccgcgccactggcgatcgtcgcg
ctggatccgtccggtcgcatccagtacatcaatcgatttctggaggagctgagcggccgt
cggctggccgagatcgccggccgggactggttcgacacgttcctgccggagcgtgatcga
gtacggattcgcgagatctttcgaacagccgtgacgcaggcgccaacccgcggcaatcgc
aacccgattgtcaccgcttcgggcgaagagcgggacattgagtggaacgacgagctgctt
caggacgaacagggacgcgtggccggcctgatcgcaattggccaggacgtcacggaacag
gtccgggccgagcgagcagctcgtgagagcgaagaacgctttcgaaagctgatggagcac
agcaccaaagtcatcgcactgtacgacgcagacacgcgaattctgtatcagagcccgtcc
gtccgcgatgtgctcggctacgaacccgaggagatgatcggacgactcgcgttcgagtac
tgccatccggacgatcggccggcgatccgcgaacggatgccggaaattctgtcgaccccc
ggagcgattggaaaagttgagctgcgcagccgctgcaaggatggctcctaccgctggctg
gagctgatcgccacgaaccggctccacgatccgacgatccgggccgtcgtcgggagctat
cgagacatctccgcacaaaaggcggtggaagagatcctgcgcctgcaagagcaggccatc
gcgctgtcgctcagaccaatcctgtttgcggacggcgatggttgtctgaactcagccaat
cgggctttcgtgcgaagctggggttacgcggacacatcggacatcgtcggtcgccggctg
actgaagtctgcggcccccccgcggctgtgggcgagatcctcgacaagttgcggggagat
ggaaactggatcggagaactgacgggaacccgccacgacgggactccgtttccaatcgaa
tgcactgccgttgcaattcgcgacgacaacgaccggctgaaatccctcatgatttcgtgc
gcggatatcacggagcgaaagcggactcaggaaacgctgcagctcagcgagcggcgattt
cggaagctgattgagaacagcgcagacgcgattgcgctctacgatgccgccgggacgatt
ctgtatcgcgttccgacggcgaccgccatgttgggctatcggtcggatgaactgatcgga
cagagcgccttcgactattgccatccggacgacgcccccctggcgaaaggagtgctcctg
gcagtcctggagcggcccgatcagccggtccgcctcgagcttcgctgccgcacgaaaagc
ggttcctaccgttgggtggaactggtcgcgaccaaccagcttgaagagcctgcagtccgt
gcgattgtcggcaactaccgcgacatcacggaccgaaaggagtccgaagagcgcgaggcg
gtccggctggcgaaattgcgacgactctccgaattgagcatgcggatggccggcgagccc
ccgtccgtattcacgcacgtcgtgcagatgatcggcgagctgttcggcgtcaaaatggtc
tgcctgatggtcgtcgaaaacgaggatctcgcgttccaggcgattttcgcgaacggccgg
gcaaccgtcgatcatcaacgttgcgcgttggccggcaccgcctgcgggctcgttgcctcg
accggaaaactcctgatcttcgaccgtgttcgagagagatttccggattcgaagattttt
caagagcacaacatcgtcacctactgcgggttccccgcagtcgacggcaaaggttgcgtc
gccgccgtcgtttgcctgctgcacgatcatccgcgcgagttcgcagaggaagatcaggag
ttgctccggctgatcgggcagcgcgtcgccaccgaagtcgaacgcacgagaattcaaaca
gcccggcagcgcgccgaagcggagctgcgcaacagcgaggaacgattccggaccttgttc
gaatcggccccgatccccatcgttctgaccgacctcgacggcaggtactccgccgtcaat
ccggcatttgagtcctcgaccggattttccgccgatgaggtgatcgcaaaaacttcggtc
gacatcggactgattgccgccgagaccctcgaagctcgcgccgccagcgcggccctgaga
tctcacgggcgcgtcgacaatctggaagttctgacgcggacccgttcgggccagttgaga
aattgtctgttttcgtcgcgagtggtcagtctcggcgaagccccgcaggtcctctcgctg
gcgatcgatatcacagaacgcaaacaggcggaagcagaacttcgcacgacgaaggaacgc
tacgagctggtgatccgcggattgaacgagggggtctgggatctcaatctggtgacaaac
gagctgactccttccgagcgcctgctcgaaatgatcggattcgatcgaggcgagatctct
cccgacctcaatgcctggctcgatctcgttcatcccgaagaccgttcgatggtcgccgaa
cagattcgtcgccacagcgcacgccgcgaaccgtacagcatccgtttccggcatcgacat
aagtcgggagactatctctggttgcacggtcgagggcaggcggtctggaacgaacgggga
gaagtgattcagctcgccggttcggtcgccgacattacttcgcaggttgaagcgcagcag
gcgctggaggccagcgaagagcgttttcgaatgctcttcgaggcggctccgttcgccgtc
acggtcaacggcatggacggccgatttaccgccgtcaatcccgcgttcgagcaactgagc
ggatacgccgccagcgaagtcctagggcggatcccgttggatctcggaatgggaaccggc
tccgttggcgtcgagctggtcgtcgacattctcgagcgatccggccgactggattatgtc
gaaacgacgacccgcacgaagggcggtcgccgccgaaacgtcctgttctgctgccggctg
gtcactctgggaggcaaacgccagatcctgtcgtcgtcgatcgacattaccgatcgcaaa
cgcgccgaagaggcgctgcgcaccagcgaacagcgactcgccgaggcccagcgaatcgcc
cacgtcggcaactggcactgggagattcagaccgatgaaatcgcctggagcgacgaggtc
tatcggattttcggaatgacgccccgatcgatcacgccccactatcagaccgagttcctg
aatctcgcccaccccgaggaccgttcggcaatcatcgctgccgtccgcgaaacactggag
accggccgcccgtacgtcatcgagcaccggatccgccgcgccgacggaaccgagcgcatt
gttcgtgaaaacggagaagtcgtccgcgacgagcatgggcatacgatcggtatgaagggc
accgtgcaggacatcaccgaacggatcgccgccgagtcgcaactgaagctcctccgcgat
gaaatggcgcacgtagcccgcctcggcatgctgggagaactggccgccgggatcgcgcac
gagctcaatcagcccctcgccgcaatcgccaactacgccttcgccgtcgaatcgcggctg
gctcgccagtcggaggccggacgccgacaggcgccggaatcgaaccggtcgattatccga
cggatttccgatcaggccgagcgggggggcgagatcatccggcggctccaggcgatgatt
cgcaaccagccgtcgcagcggtcgaccgtctcgatctccaggctgattgacgaagtgctg
gccctcctggccggtgatctgcggctggcccagattgatgtttccgtcgacgcgcccgag
tccctgccctccgtcatggttgatcctgttcagattcagcaggttctgtttaatctgatc
cgaaattcgatcgagtccttgcgacagcagtcggagaatcgccgcctgggaattcgggcc
gatctcgaaccggagtcgatgctccggattcgagtccgcgactccggagcaggcgtcccg
gccgatatgcaaccgcgcctcttcactccgtttgcaacgtcaaaacccaaggggctgggg
ctgggactgcccatcagcaagcgtatcatcgagttccacggcggcgagatttgctgcaat
gccgcaatcgactctggattcgaggtctgtttcagcctgcccatcgccgacggagaaagc
tgctcacatgcctga
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