Planctellipticum variicoloris: SH412_002225
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Entry
SH412_002225 CDS
T09866
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar02010
ABC transporters
pvar02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SH412_002225
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
SH412_002225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvar02000
]
SH412_002225
Transporters [BR:
pvar02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
SH412_002225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
WLD12099
LinkDB
All DBs
Position
complement(2874392..2875525)
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AA seq
377 aa
AA seq
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MSRQPWSLICLGLSVACTTLLVGCGEPSIPREAGSSSAAKAPEGAAGGKQRFVFLTNGNS
PYWDACRAGIQDAEKELNLADAGFTAIMETGDGTVEGQLNKLKQFGGQADIAGIAVSVQQ
ADNAAIAAQLKELRDKGIPILAVDSDVERATFRNSRDAFIGTDNVAGGQVLGLCAKALRP
EGGEFVSFVGDLAAQNAKDRIGGFAAGAGEKFVAKDAMPDANKPDVARENVRNALLSHPQ
LNTLVGIWSYNAPAIVDVLREKNRRKDFAVVVFDAEPLTIQAAADGDIDAMVVQNPYAMG
LEAIRLLKALKTKDDATIKQMLPNLGQPEGDIFDTGLKVVVPNADSPVEKDLFTGNVEFL
TLDEFNAWLAKYNLTQS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtgagccggcaaccctggagcctgatctgtcttggcctgagcgtcgcctgcaccaccctg
ctcgtcggttgcggcgaaccttccattccgcgggaagccgggtcgtccagcgccgcgaaa
gcgccggagggagccgccggcggcaagcagcggttcgtctttctgaccaacggcaactcc
ccctactgggacgcctgccgggccggcattcaggacgccgaaaaggaactcaacctcgcc
gacgccgggttcacggcgatcatggaaaccggtgacggcaccgtcgaaggccagctcaac
aagctcaagcagttcggcggccaggccgatatcgccggcatcgcggtctcggtccagcag
gccgataacgccgcgatcgccgcccagctcaaggaactgcgcgacaagggaattccgatt
ctcgccgtcgactccgacgtcgagcgggcgaccttccgcaattcccgagacgccttcatc
gggaccgataacgtcgccggcggccaggtcctcggcctgtgcgccaaggccctccggccc
gagggcggcgagtttgtctcgttcgtcggcgatctggccgcgcagaacgccaaggaccgc
atcggcggcttcgccgcaggggctggcgaaaagttcgtggccaaggacgccatgccggac
gccaataagccggacgtcgcccgcgagaatgtccgcaatgccctgctcagccacccgcag
ctcaatacgctggtcggcatctggtcctacaacgccccggccatcgtcgacgtcctccgc
gaaaagaaccgccgcaaggacttcgccgtcgtcgtcttcgacgccgagcctttgacgatt
caagcggccgccgacggggacatcgacgcgatggtcgtccagaatccgtatgccatgggt
ctggaagcgatccgcctgctgaaggcgctgaagacgaaagacgacgccacgatcaagcag
atgctccccaacttaggccagcccgagggagacatcttcgacaccggcctgaaagtcgtc
gttccgaacgccgactcgccggtcgagaaagacctcttcaccggcaacgtcgagttcctg
acgctcgacgaattcaatgcctggctggcgaagtacaatttgacgcagtcttga
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