Planctellipticum variicoloris: SH412_002366
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Entry
SH412_002366 CDS
T09866
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pvar
Planctellipticum variicoloris
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvar03016
]
SH412_002366 (truB)
Enzymes [BR:
pvar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SH412_002366 (truB)
Transfer RNA biogenesis [BR:
pvar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SH412_002366 (truB)
Prokaryotic type
SH412_002366 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WLD12235
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All DBs
Position
3063572..3064468
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AA seq
298 aa
AA seq
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MPPLPPLSGLLNVHKPEGWTSRDVVNRVQRLVRPAKVGHAGTLDPLATGVLVVCIGSATR
LISFVQDSPKRYRGRFRLGLSSDTEDITGNVTVRGDAGPIRRADLESLLPEFTGEILQRP
PAYSALHVAGQRAYDLARAGQAVDLAPRPVRIDRLHLSDFALPDFELEITCGSGTYVRSL
GRDLGERLGCGAVMTALVREAVGAFELSSAIAADPLDLDAIKAALAPCRAAVAHLPSVTI
PADALLALRQGKPLAAAPPERSEIGRQVAILSEAGDLLGIAERLPDPDRLQPRIVLAG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcctctccctccgttgtccggtctgttgaatgttcataaaccggaaggctggacc
tcgcgcgatgtcgtcaatcgcgttcagcgtctggtccgacctgccaaagtcggacatgcc
ggcacgctcgacccgctggccaccggcgttctcgtcgtctgcatcgggtccgccacgcgt
ttgatttccttcgtccaggactcccccaagcgctaccgcggccggtttcggctgggtctt
tcgagcgacaccgaggacatcaccggcaacgtaactgtgcggggcgacgccgggccgatc
cgccgagcggatctcgaatccctcctgccggaatttacaggagagatcctgcagagacct
cccgcctactcggctctgcatgtcgccggccagagagcctacgacctggcgcgggccgga
caggccgtcgatctggcgccgcggccggtccgcatcgatcgactccatctgagcgacttc
gcgctgcccgatttcgagctggaaatcacctgcggcagcggcacctacgtccgttcgctg
ggacgggacctcggcgaacgcctcggctgcggcgcggtcatgacggccctggtccgtgaa
gccgtgggagctttcgaactcagctccgccatcgcagccgaccccctcgacctcgacgcc
atcaaggccgcgctggccccgtgccgggccgctgtcgcccatctgccgtcggtcacgatt
cccgccgacgcacttctcgcattgcggcagggcaagccgctggcggccgctccgccggaa
cgctctgagattggccgacaagtcgcgatcttgagcgaggcgggagatctgcttgggatc
gccgagcgcctgcccgatccggaccgtctccagcccagaattgtcctcgcaggatga
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