Planctoellipticum variicoloris: SH412_002464
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Entry
SH412_002464 CDS
T09866
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
pvar
Planctoellipticum variicoloris
Pathway
pvar03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SH412_002464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pvar03011
]
SH412_002464
Ribosome [BR:
pvar03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SH412_002464
Bacteria
SH412_002464
BRITE hierarchy
Motif
Pfam:
S1
S1_2
Spt6_S1
PCB_OB
DUF2110
CsrA
Motif
Other DBs
NCBI-ProteinID:
WLD12331
LinkDB
All DBs
Position
complement(3198280..3200124)
Genome browser
AA seq
614 aa
AA seq
DB search
MVDRNLLRDFNVSDDELDDVFAGTLQHVDGEEFEGDGIDSLYTSIAAYDVNSIIEGSVVR
VEGEEVLIDIGYKSEGIVAIDEWDGEEPPKPGQRVAVLLEEIEDEFGLILLSKRKADRIK
KWMDITSSKKEGDVVTGHVIRKIKGGLLVDIGVNVFLPASQVDIRRPPDIGNYIGTDIDC
LILKIDESRRNIVVSRRRLIEVQREEMKKNLLAEITEGQIRKGIVKNIADFGAFVDLGGI
DGLLHITDMSWGRIGHPSEMVKIDDEIEVKILHIDRDREKIALGLKQKEKSPWDDVETKY
PVGTKIKGEVVNVMSYGAFVKLEDGIEGLVHISEMSWTKRVNHPTELVNPGDEVEVVVLG
INKDKQEISLGMKQALPNPWDQVAEKYPPGAIVNGTVRNLTNYGAFIELEEGVDGLLHVS
DMSWTRKISHANEMLKKGDPITCQVISVDQERKRIALGLKQLAEDPWENQIPNKYQPGEQ
VTGKVTKITNFGVFVELEPELEGLLHVSELSDQKIENPETFVKVGQDLDVRILRIDPVDR
KIGLSRKTSPDYAAAAAEDGGKGAAAPAAGPRPRTELKGGTEGSSGPLFTLGGGAAEEPA
AEAKVEDETPTPAE
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggttgatcggaacctccttcgagattttaacgtcagcgacgacgaactggacgacgtc
tttgcggggacgctgcagcacgttgacggcgaggagtttgaaggggacggcatcgactcc
ctgtacacgagcattgccgcctacgatgtgaattcgatcatcgagggctcggtcgtacgg
gtcgaaggcgaagaagtcctcatcgacatcggatacaagagcgaaggcatcgttgcgatc
gacgagtgggatggcgaagagcctcccaagcccggccagcgcgtcgcagtgctgctcgaa
gagattgaagacgaattcggcctgattctgctttccaagcggaaggccgaccgtatcaag
aagtggatggacatcaccagctccaagaaggagggagatgtcgtcacgggccatgtcatc
cggaagatcaagggcggtctgctggtcgatatcggcgtgaacgtcttcctgcccgccagc
caggtcgacattcgccgtccgcccgacatcggcaactacatcggcaccgacatcgactgc
ctgatcctgaaaatcgacgagagccgccgcaacatcgtcgtctcccgtcgccggctgatc
gaagtccagcgcgaggagatgaagaagaacctcctcgccgagattaccgaaggccagatc
cgcaaggggatcgtcaagaacatcgccgacttcggcgcgttcgtcgacctgggcggcatc
gacggcctcctgcacatcacggacatgagctggggccggatcggccacccgtccgagatg
gtcaagatcgacgacgagatcgaggtcaagattctgcatatcgaccgggatcgcgagaag
atcgcgctcggcctcaagcagaaggaaaagagcccctgggacgacgtcgagaccaagtac
ccggtcgggacgaagatcaagggggaagtcgtcaacgtcatgtcttacggcgccttcgtc
aagctggaagacggcatcgaaggcctggtccacatcagcgagatgtcctggaccaagcgc
gtcaaccacccgaccgagctggtgaaccccggcgacgaagtcgaagtggtcgtcctcggc
atcaacaaggacaagcaggagatttcgctgggcatgaagcaggccctgccgaacccctgg
gaccaggttgccgagaagtacccgcccggggcgatcgtcaacggcacggttcgcaacctc
accaactacggcgcgttcatcgagctggaagagggcgtggacggcctgctgcacgtgagc
gacatgtcctggacccgcaagatctcccacgcgaacgagatgctgaagaagggcgatccg
atcacctgccaggtgatttcggtcgaccaggaacggaagcggatcgcgctggggctgaag
cagcttgcggaagatccgtgggaaaatcagattcccaacaagtatcagccgggcgaacag
gtgacgggcaaggtcacgaagatcaccaacttcggcgtcttcgtggaactcgaacccgag
ctcgaaggcctgctgcacgtttctgagctctccgatcagaagatcgagaaccccgaaacg
ttcgttaaggtcggtcaggacctggacgtccggatcctgcggatcgatccggtcgatcgc
aagatcggtctcagccgcaagaccagccccgactatgctgcggccgccgcggaagacggc
ggcaagggagcggcagccccggcagccggtccgcgtccgcggaccgagctcaagggagga
accgaaggctcatcgggtccattgttcacgctgggtggcggagcggcggaagaaccggcc
gccgaggccaaggtcgaagacgaaacgccgacgccggcggaatag
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