KEGG   Planctellipticum variicoloris: SH412_002687
Entry
SH412_002687      CDS       T09866                                 
Name
(GenBank) WD40 repeat domain-containing protein
Organism
pvar  Planctellipticum variicoloris
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WDR55 Beta-prop_Aladin WD40_Gbeta Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Ge1_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st PD40 WDR90_beta-prop_4th Beta-prop_EML CFAP251_N Beta-prop_RIG_2nd Beta-prop_WDR41 NBCH_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_Nup120_160 Beta-prop_IFT140_1st Tricorn_N Tricorn_2nd Beta-prop_SCAP DSE1_N Beta-prop_WDR35_TULP_N PQQ_2 Beta-prop_WDR19_1st Beta-prop_ACSF4 TruB_C Beta-prop_SPT8 SLT_L
Other DBs
NCBI-ProteinID: WLD12548
LinkDB
Position
3497864..3500662
AA seq 932 aa
MCVCGAKQRSLRSTLRRKFLFHAAASGKRSSPSESSRPPSIPFTRKSHPASVSADDSRDS
FLTGRSMSSDGTAKSFIILTTIAIALLIASCERRKPVTETRTGRISAATGDAQIIMPKVV
DGAEAFSLYELSNAALAREQGRLAEELHWYLLAIETSSSAKPGTELDRLNRAARWLLPPS
AQRLAATVRHGDRIYSARFSPDGTRFVTASADGTARVWNTRTGRPSGLVLRHDGTVSVAA
FSPDGTMVVTTGADGTARIWNAVSGEPVSPPLVHEAYVLGLSFSRDGSRFVTACIGGTVR
VFETATGKTACPPLPHEDYVINAAFSPDGTRIVTACGDGQARIWNAATGESVGAPLSRGS
SLTHAEFSPDGGRIVTACQDSDATAAVWDVTSGQAITPPLRHSSSVLNATFSPDGRRVVT
SSRDGTAQVWDAATGEAVGIPLRHASEVIGAVYSADGKRVYTASRDHSAQAWDAETGQRL
GPPFKHDGIVRDLALSPDGRFLATAGFDGAARIWELATDDPSPVTLPHGDSVTEAWFSPD
GSRVVTSSDDKTARVWDASSGKPVTPPLEHEGMVTYATFSPDGTRVVTTSLDGTARIWDA
STGKAISPPFEHSDVVWWAKFNFDGSRIATASYDNTARIWETLTGRQVGGPLQHEDHVWS
AEFHPDGSRVVTAGDDGIVRIWDAGTGRNVGPNLQDSGAATRARFSPDGTRILLVCNNHT
VRLCDSTTGAPASAPLIHGDEIRYAGFSPDGKLIVTACDDQTVQVWEVSTGRRFRPEFRC
SARMIYVGFSADGLRIVAHGDGTAAHVWDLLTTLPLDHSIPRDLKVFSATFSPDGTRIIT
GNKEDAAQIWTLLPPAPRTGIDGNEITVSRLRLAIELRTGCLLDPMSRAIDPISSAEMLR
RWEQLGPTENRHDVRAWQDLTKEELDELGVSQ
NT seq 2799 nt   +upstreamnt  +downstreamnt
atgtgcgtctgcggagccaagcaacgttcgctgcgttccacgttgcgccgcaagttcctg
tttcatgccgccgcaagcggtaaacgatcatcaccatcagaaagtagcaggcccccttcc
atcccgtttacacggaaatctcatccggctagcgtatccgctgatgacagccgagattct
tttctgacaggccgttcaatgagttccgacgggaccgcgaagtccttcatcattctcaca
accatcgctatcgcactattgattgcgagctgtgaacgaagaaagcctgtgacggaaact
cggacaggaagaatcagcgccgccaccggggatgctcaaatcatcatgccaaaagtcgtc
gatggcgccgaggcgttttcgctgtatgaactttcgaatgctgccctcgcccgcgaacag
ggccggctcgccgaagaactgcattggtatctcctggccatcgagacctcttcgtcggca
aaaccagggacggaactggatcggctgaaccgtgctgcccgctggttgctgccccccagt
gcccagcgactggcagcgactgtacgtcacggcgacagaatctacagcgcgagattcagc
ccggacgggaccaggttcgtgactgccagcgccgacggaacggccagagtctggaacacg
cgaaccggccgcccgtcaggtctggttctccgccacgatggcacggtctcagtcgccgca
ttcagccccgatggaacaatggtcgtcacgaccggcgcagacggaacggcacgtatctgg
aacgcagtcagcggtgaacctgtcagccctccgctggtgcacgaggcgtacgtgctcggc
ctctcattcagtcgcgatggttcgcgattcgtcacagcgtgcattggcgggacagtcaga
gtcttcgagacggcgaccgggaaaacggcctgcccgcctctgccgcacgaagactatgtg
attaacgccgccttcagcccggacggtactcgcatcgtcaccgcctgcggagacggccag
gcccgcatctggaatgctgccaccggggaatcagtcggtgcgccgttgtcgcgaggaagc
tcgttgacgcatgctgaattcagcccggacggcggtcgcatcgtgacggcctgccaggac
agcgacgcaaccgcggccgtctgggatgtgacatccggccaggccatcactccgccgctg
cgccactcatcaagcgtccttaacgccaccttcagccctgatggccgccgtgtagtcact
tccagccgtgacggcaccgcacaggtttgggacgctgctaccggcgaagcggtcggcatt
cctctgcggcacgcgagtgaagtgattggggcggtgtactccgccgacgggaaacgtgtc
tacaccgcgagtcgggaccatagcgcccaggcgtgggatgcggagactggccagagactt
ggcccgccattcaaacacgacggcatcgtccgagacctggctctcagtccggacggccgg
ttcctcgcaaccgcgggctttgatggcgccgcacgcatctgggagttagcaaccgacgat
ccgtcgcccgtcacgctgccccacggggactccgtgaccgaggcctggttcagtccggac
ggcagtcgggtcgtgacctccagtgacgacaagacggcacgtgtctgggatgcttccagc
ggaaaaccggttacccctcctctggagcatgaaggaatggtgacttacgccactttcagc
ccggacggaaccagggtcgtcacgacaagcctggacggtaccgcccgcatctgggatgcc
agcacgggtaaggcgatttcccccccttttgaacactccgacgtggtctggtgggcaaaa
ttcaatttcgacggttcgcggatcgctactgccagctacgacaatacggcccgcatctgg
gagacattaaccgggcggcaggtcggcggcccgctgcaacatgaggatcacgtctggtca
gccgagttccaccccgacggcagccgggtcgtaacggccggcgatgatgggatcgtcagg
atctgggatgccggtaccggccggaatgtcgggcccaatctgcaggactcaggcgcagca
acgcgagctcggttcagcccggatggcacacgcattctgctcgtgtgcaataatcacacc
gtacgcctctgcgacagtacgacgggggcgccagcatctgcaccactgatccacggagat
gaaattagatacgcaggcttcagtcccgacgggaagctgatcgtgacggcctgcgatgat
cagaccgttcaagtctgggaagtctcgacgggcagacgcttccgaccggaattccgatgt
tccgcacgaatgatctatgtgggattcagtgccgacggcctgcgcattgtcgcccacggc
gacggcacggcagcccatgtctgggatctgctgacaacactgccgctcgatcactcgatc
ccgcgcgacctcaaagtcttcagtgcgaccttcagcccggatggaacccgcatcatcacc
ggcaacaaggaagacgccgcccagatctggacgttacttcctccagccccacgcaccggc
atcgacgggaacgagattaccgtgtcgcgtctcaggctcgccatcgagttacgcaccggc
tgccttctcgaccctatgagccgggcaatcgatccgatttcttccgcagagatgctgcgt
cgctgggagcagcttggccccacggagaatcgccacgatgtccgcgcgtggcaggatctc
accaaggaggagcttgacgagcttggagtttcccagtga

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