Planctellipticum variicoloris: SH412_002872 Help Entry SH412_002872      CDS       T09866                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism pvar  Planctellipticum variicoloris Brite KEGG Orthology (KO) [BR:pvar00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pvar03400]     SH412_002872 Enzymes [BR:pvar01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      SH412_002872     5.6.2.6  RNA 3'-5' helicase      SH412_002872 DNA repair and recombination proteins [BR:pvar03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     SH412_002872 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_Lhr DEAD WHD_4th_Lhr Helicase_C WHD_3rd_Lhr ResIII Cas3-like_C_2 WHD_2nd_Lhr Motif Other DBs NCBI-ProteinID:  WLD12729 LinkDB All DBs Position complement(3709166..3713434) Genome browser AA seq 1422 aa AA seqDB search MPLASFHPLIQSWFASRYGEPTVTQRQGWPEIRLQRDTLIAAPTGTGKTLTAFLASLDRL LRLALAGELEDRTYVVYVSPLRALSNDIQRNLQEPLAEILRLAQETYPECPAIRAFVRTG DTPPRERQQMVRKPPQILVTTPESLYLILTGNKSREMLRSVETVIVDEIHAVARDKRGSH LALSLERLEALCERRPVRIGLSATQKPLDELAQYLSGSGRPRTSVVDIGHLRDLDLGVET PASDLQAVCSHEQWAEVYEHLVQLIESHRSTLIFVNTRKMAERVAHQLTERLGEDHVLSH HGSLAHSSRQQVEQRLKDGSLKAVVATASLELGIDVGHIDLVCQVGSPRSIATFLQRIGR AGHSLRAVPKGRLFALTRDELVECAALIHAVRNGRLDRVEIPVAPLDILAQQIVAAVACE DWDEEGLYQMVRQAYPYRDLPRTDFDAVLEMLGEGISPQRSRWGAYLHRDRVNGRLRARK SARLTAITCGGAIPEIASFRVVTDDENRTTVGTLDEDFAIESNAGDIFLLGNNSWRIRYV RGGDVVVSDAHGAPPSIPFWLGEAPGRTFELSAEVGVLREEIQALLADRTERATACDRLM TECRLTEPAAQQLLTYVDAQQAATGMVPTQRKILFERFFDESGGMQLVLHAPFGTRINRA WGLAMRKRFCRSFDFELQAAAGDNGIVLSLGEQHSFPLEQMFNLVPSRVARDVLVQAFLA VPFFKNRWRWNVTRALQLKRAMHGKRVPPHLQRMRSDDLLSAVFPAQTACQEHVVGDIEV PDHPLVRQTVDDCLQEASDLAGLMTVLQDLEAGRIEVVGLDSREPSPFSHELLNAQPYAF LDDAPLEERRARAVAMRRTLQVEALRDLARLDPDAIAQVKSEAWPLVRDADELHDVLLSQ GGIFDPDRSEWRKWFNELRDAGRATVVTSAARSQHEPRSRTLWAATERMPLIRTVWPDAE TRPDVNVPPGVRIDWSREEAIVNLVRGQMESLGPTTITALRHLVGLSPAEIEIALITLET QGAVLRGRFCGAGELEWCDRRLLSRIHRFTLEGLRRQIAPVPPEQFLQFLLRHHCIHPSL KLREQGGLLTALRQLEGFEAPAGHWERFLLPARMESFSTSWLDNVTFFGQAMWGRLRPLP VQGAMEGSTSGRPMKSLTRSTPITLMLREDLPWLLPPAPEQTTLQLTGLGSNAQAAYEAF VRYGALFPAQLGTFLQLLPSQVEDVLGELAAAGLVTSDGFPALRSLLATDNERKLKRSRL RSARYARAGLSDPSAGRWTLLRSPLLPQVEETERTENWCRLLLRRYGVMFRDLLANESAA PSWPELVRTYRRLEARGEIRGGRFVSGVSGEQYALPEVIAPLRSAGDDSDQPIVLSATDP LNLTGRIGGTPRVPASPGYSVRIVSGRLEREDLPVEAEMIAS NT seq 4269 nt NT seq  +upstreamnt  +downstreamnt ttgccactcgcgtcttttcatccgctgatccagagctggtttgccagtcggtatggcgag cccaccgtcactcaacggcagggctggcccgagatccgcctgcagcgcgataccctcatt gccgccccgaccgggaccggcaagacgttgacggcgttcctggcgagtctggatcggctg ctgcgcctggcgttggcgggggaactcgaagaccggacgtatgtcgtatacgtctcgccg ttgcgggcgttgtccaatgatattcagcgaaatctgcaggagccgctcgctgagatcctg cggctggctcaggagacgtatccggagtgtcccgccattcgggcgtttgtgcggaccggg gatacgccgcccagagaacgtcagcagatggttcgcaagccgccgcagattctcgttacg acgccggaatcgctgtatttgattctgaccggcaacaagagccgggagatgctccggtcc gtggagacggtcatcgtcgacgagatccacgccgtcgcccgggacaagcggggaagccat ctggctctgtcgctggaacgactggaggcattgtgcgagcggcgaccagttcggatcggg ctgagcgctactcagaaaccgctcgacgagttggctcaatacctgtccgggagcgggcga ccgcggacatcggtcgtcgatatcggccacctgcgggatctcgatctgggagtggaaacg cccgccagcgatctgcaggcggtctgcagccacgaacaatgggcggaggtctacgagcat ctggtgcagttgatcgagtcgcaccgcagtacgctgatcttcgtcaatacccggaagatg gccgagcgggtcgcccatcaactgaccgaacgcctgggggaagatcacgtcctttcccat cacggcagcctggcccacagcagtcggcagcaggtcgagcagcggttgaaggacgggagc ctgaaggcggttgtcgcgacggcgtcgctggaactggggatcgatgtggggcacatcgat ctggtctgccaggtggggagcccgcggtcgatcgccacgtttctgcagcggatcggccgg gccgggcactcattgcgggcggttcccaaaggacggctgttcgcgctgacgcgggatgag ctcgtggaatgcgcggccttgatccacgcggtgcggaacggccggctggatcgtgtggag attcccgtcgcgccgctcgatattctcgcccagcagattgtggccgctgtcgcgtgcgaa gactgggatgaagagggcctgtaccagatggtgcggcaggcgtatccctatcgggacctg ccgcggaccgattttgacgccgtcctggagatgctcggcgaagggatctcgccgcagcgg agtcgctggggagcgtacctgcatcgggaccgcgtgaacggtcgcttgcgcgcccgtaag agcgcccggttgacggcgattacctgcggcggagcgattccggagatcgccagtttccgc gtggtgacggacgacgaaaaccggacgacggtcggcactctcgacgaagattttgcgatt gaaagcaacgccggcgacatctttctcctggggaacaattcctggcggattcggtacgtg cggggcggtgatgtcgtcgtctctgacgctcatggagcgccccccagcattccgttctgg ctgggagaggcccctgggcggacctttgaactttccgcggaagtcggcgtgctccgcgag gaaattcaggcgctgctggcagaccggacagagcgtgcaacggcgtgcgatcgactgatg accgaatgccggctgacggagcccgcggctcagcagttgctgacgtacgtcgacgcccag caggcggcgacgggaatggttcccacgcaacgaaaaatcctgttcgagcgattcttcgat gaatcgggcgggatgcaactggtcctgcacgcgccgttcgggacgcgaatcaaccgggcg tgggggctggcgatgcgcaagcggttctgccggtcgttcgacttcgaacttcaggcggcc gccggagacaacggcatcgtcctctcactgggagaacagcacagttttccgctcgagcag atgttcaatctggtgccttcgcgcgttgcccgagatgtcctggtgcaggcgtttctggcg gtgccgttcttcaagaaccggtggcgctggaacgtgacgcgggctttgcagctcaagcgg gcgatgcacggaaaacgagtgccgccccacctgcaacggatgcgatccgacgatctgttg tccgcggtgtttcccgcccagaccgcctgccaggaacatgtcgtcggggacatcgaagtg cccgatcatcctctcgtccggcagacggtcgatgactgcttgcaggaggcctccgatctg gcggggttgatgacggttctgcaggatttggaagcggggagaatcgaagtcgtcgggctc gattcgcgcgagccgtcgccgttctcgcacgagctcctcaatgcgcagccctacgcgttc ctggacgacgccccgctggaggaacgtcgggccagggccgtcgcaatgcgaagaacgttg caggtcgaagccctccgcgacctggcccgactcgatcccgacgccattgcccaggtgaag tccgaagcctggccgctggtccgggacgcggatgagctccacgatgtcctgctgtcgcaa ggggggatcttcgatccggatcggtccgaatggcggaagtggttcaacgagttgcgtgac gccggtcgcgcgacggtcgtgaccagcgccgcccgatcccagcacgaaccgcgcagccgg accctctgggcggcgaccgagcggatgccgctcatccggacggtctggcccgatgccgaa actcgcccggacgtcaacgtccctccaggagtccgcatcgactggtcgcgggaagaggcg atcgtcaatctcgtccgggggcagatggagtccctgggaccgacgacgatcaccgcgttg cgccatcttgtcgggctgtctcccgccgaaatcgaaatcgccctgatcacgctggaaacg cagggggcggtgttgcgaggacggttctgtggagccggcgagctggagtggtgcgaccgc cggttgctgtcgcgcattcaccggtttacgctcgaagggctgcgacgccagatcgctccg gttccaccggagcagtttctgcagtttctgttgcggcaccattgcatccatccatcgctg aagctccgcgaacaggggggccttctgacggcgctgcgccagttggaaggatttgaagcc cccgccggccactgggaaagattcctgttgccggcgcggatggaatcgttcagcacgagc tggctcgacaacgtcacctttttcggccaggccatgtggggtcggttgcgtccgctgcca gttcagggagcgatggagggatcgacgagcggtcggccgatgaaatcgctgactcgctcg actcccatcactctgatgctgcgcgaggatctgccctggttgcttccccctgcgccggaa cagaccacgcttcagcttacgggactcgggagcaatgcccaagccgcttacgaagccttc gtccgctacggagccttgttcccggcacaactgggaacgtttctgcaactgctccccagc caggtggaagatgttctcggcgaactggccgcggcgggactggtgaccagcgacggcttc ccggcgctgcgatcgctcctcgccaccgacaatgagcgcaagttgaaacgatcgcgtctg cgcagcgcccgctatgcccgagccgggctgtccgatccgtccgcagggcggtggacgctg ctgcggtctccactgcttccgcaagtcgaagagacggaacggacggaaaactggtgccgg ctcctgctccgtcgatacggcgtcatgttccgcgatctcctggcgaacgaatcggcggct ccttcatggccggaactggtccgcacgtatcgtcgactggaggctcgtggcgaaatccgc ggcggccggttcgtttccggcgtctccggagaacagtacgcgttgccggaagtgattgct cctctccgatccgcgggagatgacagcgatcagccgatcgtcctttccgcgacagatccg ttgaacctgaccgggcggattggcggcacgccgcgggtcccggcttcgccagggtattcg gtgcggattgtctctggacggctggaacgagaagacttgcccgtcgaggcggaaatgatc gcgtcgtga

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