Planctellipticum variicoloris: SH412_002959
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Entry
SH412_002959 CDS
T09866
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
pvar
Planctellipticum variicoloris
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
SH412_002959
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Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
Tex_N
HHH_9
S1
YqgF
HHH_7
HTH_23
S1_RRP5
HHH
HTH_Tnp_ISL3
HTH_20
Motif
Other DBs
NCBI-ProteinID:
WLD12816
LinkDB
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Position
complement(3826061..3828412)
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AA seq
783 aa
AA seq
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MADATTAIELSGIAAALKLSVEQVRKTLELLDAGNSIPFITRYRKEQTGNLDETQILEIQ
DRVRLARQLAERAEDVLRLIEAQGKLTGELRRQILAADSLKRLDDLYLPFRPKKRTRASA
ARERGLDPLAAQVWEGALNEAALKARAASFVDPGKELADVEAVLQGVHDILAERIGEEAM
LRERCRKLAWEGGRLSSAATKGAAQTHQEFRDYFDYGEPLSRMPPHRVLALNRGEEAGAL
RVKFEWDAARALESARHILRLDRHPAQAILERAAEDAIGRFLEPSIEREVRRDLTERAQK
HAIDVFARNLRQLLLQPPVQGRRVLAIDPGYRTGCKIAALDESGSILALDVLTIIGSQEK
RNETRRRLIEIIDQCECRVVAIGNGTACRESEELVAEIISTDRPDLSYVVVNEAGASIYS
ASAVAREEFPQLDATARGTISIGRRLQDPLSELVKIEPQHIGVGMYQHDLPAKQLKEVLD
RVVESCVNFVGVDLNRSSASLLAHVSGFNQLVARRVVEYRSQHGPFRSRKQLLDVPGIGP
GTFTQAAGFLKLTGEEPLDNTWIHPESYDVARRLLARVGLKAADLSPGAEHSEQLRERLA
GASVTELADELGVGEPTLRDIVEALQRPGRDPRTDLPPPMFRKGVLSLDDIEVGMELQGT
VLNVVDFGAFVDVGLKDSALIHISQMSTRFVKSPQEVVSVGDVVKTWVLNVDRERRRIGL
SLISPDGASSPPAGNAEKPAAKPAANRQPAPSRPKADRPAPAAGQPLSGFDQLKQAWNAR
PDR
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcgacaaccgcgattgaactttccggcattgccgccgcgctgaagctgtcg
gtcgagcaggtccggaagacgctggagctgctcgacgccgggaactccattcctttcatc
acgcgttaccggaaagagcagaccggcaacctggacgagacgcagattctggagatccag
gatcgcgtgcgcctcgcgcggcaactggctgagcgcgctgaggacgtcctgcggctgatc
gaggcgcaaggcaagttgaccggggagctgcgacgtcagatcctggcggcggacagcctg
aagcgactggatgacctgtatctgccgtttcgccccaagaagcggacgcgggcgtcggca
gcccgcgagcgcggactcgatcccctcgccgcgcaggtctgggagggggctttgaacgag
gctgcgttgaaggcgcgcgcggcgagcttcgtcgatcccggcaaggaactggccgatgtg
gaggcggttctgcagggagtgcatgacatcctggccgagaggattggcgaagaagcgatg
ctgcgcgagcgttgtcgcaagctggcctgggagggggggcggctttcgtccgcagcgacg
aagggggccgcccagacgcaccaggagtttcgagactacttcgactacggcgagccattg
tctcggatgccgccgcatcgcgtgttggcgctgaatcgcggcgaggaggccggggcgctg
cgcgtgaagttcgaatgggatgccgcccgggcgctggagtcggccaggcacattttgcgg
ctcgaccggcatccggcgcaggcgatcctggaacgggctgccgaagatgcgatcgggcgg
tttctggaaccgagcatcgagcgagaagttcggcgggatctgaccgagcgggctcagaag
cacgcgatcgatgtgtttgcgcggaacctgcggcaactgctgctgcagccgccggtgcag
gggcgacgcgtgctggccatcgaccccggctaccggaccggctgcaagattgcggcgctg
gacgagtcggggagcattctggcgctggacgtactgacgattatcggcagtcaggagaag
cgcaacgagacgcgtcgccggcttattgaaatcatcgaccagtgcgaatgccgcgtcgtc
gccatcggcaatggaaccgcctgccgggagtcggaggagctggtcgccgagatcatcagc
actgaccggcccgatctcagctatgtggtggtcaacgaagcgggggccagcatctattcc
gccagcgccgtggcccgcgaggagtttccgcagctcgatgcaaccgcgcggggaacgatc
agcatcggcaggcggctgcaggatccgctgagcgagctggtcaagatcgagccgcagcac
atcggcgtcggcatgtaccagcacgacctgcctgcaaagcagctcaaggaggttctcgac
cgggtcgtggaatcgtgcgtcaacttcgtgggcgtggacttgaaccggtcgagcgcgtca
ttgctggcgcacgtttccggcttcaatcagctcgtcgcccggcgggtcgtcgagtaccgc
agccagcacggtccgttccgatcgcggaagcagttgctggatgttcccggcattggtccg
gggacattcacccaggcggccggattcctcaaactgaccggcgaagagccgctggacaat
acgtggatccatcccgagagctacgacgtcgcccggcggctgctggcccgcgtgggactc
aaggcggcggacctgagccccggcgctgaacatagcgagcagttgcgggagagacttgcc
ggggcgtctgtgacggagctcgccgacgagctaggggtcggagagccgacgctgcgggat
atcgtggaagcgctgcagcgtccagggcgcgatccgcgaaccgacctgccgccgccgatg
ttccgtaagggcgtgctgtcgctcgacgacatcgaggttggcatggagctgcaagggacg
gtgctgaacgtcgtcgatttcggcgcgttcgtcgacgtggggctcaaggactcggcgctg
atccatatcagccagatgtcgacgcgattcgtcaagtcgccgcaggaggtcgtttccgtt
ggcgacgtcgtgaagacctgggtgctgaacgtcgaccgcgaacggcgccggatcgggctg
tcgctgatttcccccgacggagcgtcgtcgccgccggctgggaatgccgagaagccggca
gccaagcccgcagcgaatcgccagccggctccgtcgcgaccgaaagccgatcggccggcc
ccggcggccggccagcccctgagcgggttcgaccagttgaagcaggcctggaatgcccgt
ccggatcgctga
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