Planctellipticum variicoloris: SH412_003045
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Entry
SH412_003045 CDS
T09866
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SH412_003045 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvar01007
]
SH412_003045 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvar03016
]
SH412_003045 (pheT)
Enzymes [BR:
pvar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
SH412_003045 (pheT)
Amino acid related enzymes [BR:
pvar01007
]
Aminoacyl-tRNA synthetase
Class II (U)
SH412_003045 (pheT)
Transfer RNA biogenesis [BR:
pvar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SH412_003045 (pheT)
Prokaryotic type
SH412_003045 (pheT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
Motif
Other DBs
NCBI-ProteinID:
WLD12897
LinkDB
All DBs
Position
3917318..3919345
Genome browser
AA seq
675 aa
AA seq
DB search
MIISWDWLKQYVDLDLPLEDVTTRLTMSGLNLETTEPAGSDFAIDLEVTSNRPDCLGHLG
IAREVAVLFGKTLKVPAAAPKTVAETAASATSVAIECPDLCPQYHARVLRGVKVGPSPAW
LRQRLETVGIASVNNVVDVTNYVMLECGQPLHAFDFDRLDGKKIVVRRAQAGEKLQAIDH
KEYALTPEMCVIADGKRPVAIAGVMGGATTEIESSTKNVLIEAAAFAPLTVRNTARKLNL
HSPSSYRFERALDPAGPDWASRRCCELILEIAGGELLAGSVAVGQTVVAERPPIALRFAQ
FRRILGIEIPISEAASILESLGCRQVGPVGADTAEFAPPTFRRDLSREIDLIEEVARIHG
YEQIPDDVLVPLCSSAKTRRDRVTDRVRDTLTAAGFFEAVTLSFVAAEQRALFTPHGDRP
ALEVVHSSRRHENLLRQSLVPSLLASRRENERHGVFHAQLFEVAKVYLAADSSKPETQNE
PWTISLVGGQSYQELKGVVELLARRVAPHAAVRVRPSDVGQFVPGRGAEVLLDGELWGWL
GELDRSAVSALDLRDSVCVAELNLHVLEARADLVPKAQPLPQFQAVTRDLNFVLDETVHW
SDLEQVVRSAAGPLLETVAFGGQYRGKQIPEQKKSYVVTLGYRSHERTLTGDEVDAAQQA
VIAACGQKLAATLRA
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgattatcagttgggactggctcaagcagtatgtcgacctggatctgccgttggaggac
gtcaccacccggctcaccatgtcgggattgaatctcgaaaccaccgagcccgccggcagc
gattttgccatcgacctcgaagtcaccagcaaccgccccgactgcctgggccacctgggg
atcgcccgcgaagtcgcagtgctgttcgggaagacgctgaaagtccccgccgccgctcct
aagaccgtcgcggaaaccgcggcgtcggcgacgtccgtcgccatcgagtgcccggatctc
tgcccgcagtaccacgcccgcgtgctccgcggagtgaaggtcggccccagccccgcctgg
ctccgacagcggctggagaccgtgggcatcgccagcgtgaataatgtggtcgacgtcacg
aactacgtgatgctcgaatgcggacagccgctgcatgcgttcgattttgaccggctcgac
gggaagaagatcgtcgtccgccgggcgcaggctggcgagaagctgcaggcgatcgatcat
aaggaatacgcgctcactcccgaaatgtgcgtcattgccgacggcaagcgtccggtggcc
atcgccggcgtgatggggggagcgacgaccgaaatcgagtccagcacgaagaacgtgctg
atcgaagcggctgcctttgcgccgctgacggtccggaacacggcccgcaagctgaacctg
cacagcccgtcgtcgtaccgcttcgagcgggctctcgacccggccggccccgactgggcc
agccgtcggtgctgcgaactgatcctcgaaattgcggggggcgagctcctggcgggcagc
gttgcggtcggccagacggtcgtcgcggaacgcccgccgatcgcgctccggttcgcccaa
ttccggcggattctggggatcgagattcccatctcggaagcagcgagcattctggaaagc
ctgggctgccgacaggtcggtcccgtgggggccgacaccgcagagttcgctccgccgacc
ttccggcgggatctatcgcgagagatcgatctcattgaagaggtcgcccggattcacggc
tacgagcagattcccgacgacgtgctcgtaccgctctgttccagcgccaagacgcggcgg
gatcgcgtgacggatcgcgtccgcgatacgctgaccgccgccgggttcttcgaagcggtg
acgctgtcgttcgtcgccgccgagcagcgggcgctgttcacgccgcatggcgaccggccg
gcgctggaagtcgtccactcctcccgccggcacgaaaacctgctgcggcagtcgctggtg
ccgagcctgctggcttcgcgtcgcgagaacgaacgccacggcgtattccacgctcaactg
ttcgaagtggccaaggtgtacctggcagccgattcgtcgaagcccgagacgcagaacgaa
ccgtggacgatcagcctcgtcggcgggcagtcgtatcaggaactgaagggggtggtcgag
ctgcttgcccggcgggtcgcaccccacgcagccgtccgcgtccgtccctcggacgttggc
cagttcgtccccggccggggggcggaggtgctcctggacggcgaactgtggggctggctg
ggggaactcgaccgctcggcggtgtcagcgctcgatctgcgggacagcgtctgtgtcgcc
gaattgaatctgcatgtgctcgaagcccgggccgacctggttccgaaggctcagccgctg
ccgcagttccaggcggtcacgcgggatctcaatttcgtcctcgacgaaacggtccattgg
agcgacctggagcaggtggtccggtcggcggcggggccgctgctggagacggtcgccttc
ggcggccagtaccgcgggaagcagatcccggagcagaaaaaatcgtacgtggtgacgctc
ggctaccgttcgcacgaacgaacgctgacgggcgacgaagtcgacgcggctcagcaggcg
gtgattgcggcgtgcgggcagaagttagcggcgacgttgagggcgtaa
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