KEGG   Planctellipticum variicoloris: SH412_003047
Entry
SH412_003047      CDS       T09866                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
pvar  Planctellipticum variicoloris
Brite
KEGG Orthology (KO) [BR:pvar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pvar02044]
    SH412_003047 (tssF)
Secretion system [BR:pvar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   SH412_003047 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: WLD12899
LinkDB
Position
complement(3921129..3922964)
AA seq 611 aa
MRERLEDFYEQELFFIRRMAAEFARDRPKIADRLSLSPDTRESADPHVERLIESFAFLTA
RVRLKLDDEFPELTTSLLGLLYPHYLAPVPSLSIVQFQLDPSQGQLTDGFTVPRGGRLSS
RDVGGVPCRFRTACPVTLWPIDVATTYQTAPFGAGVKLPPGLNQVEAMLRLELTIAPNVN
WSALTLDDLRVFLRGDDKTTHQLYELIFNHCVGVFVQESGGPARQLLPADSIREVGFGRD
EGLLPCDARSFPGYRLLTEYFSFPQKFLFADLTGLRSVVSRSNSRKIDVCILLDKADRSL
EARVDRDLFRLGCTPIVNLFSHQAEPIRLSHTKTEYHVVPDIRHRNSFEIHSIDAVTSTN
LDTGAVTEYQPFFACRHGRRNDFNPTYWHSRRDPSTIKNDRGTEVWLSFVDLNFNPSRPA
AEVLSISTTCSNRDLPGELRTSGGESWGFQLEGQAPLKRIEPLIPPTLPCRLPQGELHWR
LISHLALNHLSISDGAEGADSLREILKLYDYNNTRATAQQIEGITSIASRRKTARITGGP
AVGFCRGIELEVVFDPDKYSGVGAFLMASVLDKFVGLYASMNSFTRLSTRMRNAAEPFKV
WPYRVGDQTIL
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgcgcgaacgtctcgaagatttctacgagcaggagctgtttttcatccggcggatggcg
gccgagtttgcccgcgaccgcccgaaaatcgccgaccggctctcgctcagccccgatact
cgcgagtccgccgatccccacgtcgagcgactgatcgagtcgttcgcctttctgacggcc
cgcgtccggctcaagctggacgatgagtttccagagctcaccacgtcgctgctcgggctc
ctctatccccattatctggccccggtgccgtcgctttcgatcgttcagttccagctcgat
cccagccaggggcagctcaccgatggtttcaccgtgccacgcggcggacgtctcagctcc
cgcgacgtggggggcgtcccctgccggtttcggaccgcctgcccggtgacgctctggccg
atcgatgtggcgacgacctaccagaccgcccccttcggcgcgggtgtcaaactcccgccg
ggcctcaatcaggtcgaggcgatgctgcgcctcgaattgacgatcgctcccaacgtcaac
tggtccgccctgacgctcgacgacctgcgagtgttccttcgcggcgacgacaagaccacc
catcagctctacgagctgattttcaaccattgcgtcggcgtgttcgtccaggagtcgggc
ggtccagcccgccagttgcttcccgccgattcgattcgtgaagtcgggttcggccgcgat
gaagggctgcttccctgtgacgcccgttcgtttcccggataccgtcttctgaccgagtac
ttctcattccctcagaagtttctattcgccgatctgaccggcctgcgctctgtcgtttcc
cgctcgaactcgcggaaaatcgatgtctgcatcctcctcgacaaggccgatcgctccctg
gaagcccgcgtcgatcgcgacctgttccggctcggctgcacgccgatcgtcaatctcttc
agccatcaggccgaaccgatccgtctcagccacacgaagaccgagtaccacgtcgttccc
gacattcgccatcgcaattcgttcgagatccactcgatcgacgcggtcaccagcaccaat
ctcgacaccggcgccgtgaccgagtatcagccctttttcgcctgccggcacggccgcagg
aatgacttcaaccccacgtactggcactcccgacgcgatccctccacgatcaaaaacgat
cgcggcaccgaggtctggctgtcgtttgtcgacctgaatttcaatccgtcgcggcccgcc
gcggaagtcctcagcatttcgacgacctgcagcaaccgggacctgccgggcgagctgcgg
acgtcgggaggcgaaagctgggggttccaactggaaggccaggcgcccctcaaacggatc
gagccgctcatccctcccactcttccgtgtcggcttccgcagggagaactgcactggcgg
ctgatttctcatctggcgctcaaccatctgtcgatctccgacggcgccgagggagcggac
tccctgcgcgagattcttaagctctacgattacaacaacacccgcgcgaccgctcagcag
atcgaaggaattaccagcatcgccagccgacgcaagaccgcccggatcaccggcgggcct
gcggtcgggttctgccgcggcatcgaactggaagtcgtcttcgatccggacaagtactcc
ggagtcggcgcctttctgatggccagcgtgctcgacaaatttgtcggactttacgcctcc
atgaactcgtttacccggctctccacccgcatgcggaacgccgccgaacccttcaaagtc
tggccgtaccgcgtcggcgaccagacgatcctctga

DBGET integrated database retrieval system