KEGG   Planctellipticum variicoloris: SH412_003055
Entry
SH412_003055      CDS       T09866                                 
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
  KO
K11901  type VI secretion system protein ImpB
Organism
pvar  Planctellipticum variicoloris
Brite
KEGG Orthology (KO) [BR:pvar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pvar02044]
    SH412_003055 (tssB)
Secretion system [BR:pvar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   SH412_003055 (tssB)
SSDB
Motif
Pfam: T6SS_VipA Nif11 PNMA Cas9_C_2
Other DBs
NCBI-ProteinID: WLD12907
LinkDB
Position
complement(3929382..3929906)
AA seq 174 aa
MAKESLQKKLDRVRPPRVQIKYEVYVGDAMEMKELPFVVGVLGDFSGKPEKSLPALKDRK
FVDIDRDNFNKVLGAMAPRLAMQVDDTISGQADQKLNVELKFQSMDDFSPENVVKQIPLL
RALLEQRENLKNLSSRLEGNDKLDELLQQVLANSDLRASLAKELGTETPPPAAP
NT seq 525 nt   +upstreamnt  +downstreamnt
atggctaaagaaagtctgcagaagaaactggatcgcgttcgtccgccgcgcgtgcagatc
aagtacgaggtctatgtcggcgacgcgatggaaatgaaggagcttcccttcgtcgtcggc
gtcctgggagatttttcggggaagcccgagaagtccctgccggcgctgaaggatcgcaaa
ttcgtcgacatcgaccgggacaacttcaacaaagtccttggcgccatggcgccgcgcctg
gcgatgcaggtcgacgatacgatctcggggcaggccgatcagaagctcaacgtggagctc
aagtttcagagcatggacgacttcagcccggagaacgtcgtcaagcagattccgttgctc
cgggcgctcctggaacagcgggaaaacctgaagaatctttcgtcgcggctggaagggaac
gacaagctggacgaactgctccagcaggtcctggcaaacagcgacctccgcgcctcgctc
gccaaggaactcgggaccgaaacgcctccgccggccgccccgtag

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