KEGG   Planctellipticum variicoloris: SH412_003069
Entry
SH412_003069      CDS       T09866                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
pvar  Planctellipticum variicoloris
Pathway
pvar03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pvar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SH412_003069 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pvar02044]
    SH412_003069 (tssH)
Secretion system [BR:pvar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   SH412_003069 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 ATPase_2 AAA_14 Sigma54_activat AAA_7 AAA_25 Zeta_toxin TniB NACHT nSTAND3 Clp_N AAA_30 ResIII T2SSE ABC_tran_CTD TsaE AAA_18 AAA_24 ODAD1_CC RuvB_N Rad17 SRP54 Hpr_kinase_C CbiA DUF815 NBD_SMAX1 SLFN-g3_helicase DUF6657 AAA_6
Other DBs
NCBI-ProteinID: WLD12920
LinkDB
Position
complement(3957321..3959999)
AA seq 892 aa
MDINLRSLVSKLNDTCRRALESAAGLCLSRTNYSVEAEHWLQKLLEVQNSDLTKIFKHYE
VDQSRLEAALTKSIDSFKTGNGRPPALSPLLVDLVRDAWVFASVEYGESAVRSGHLLLAI
LTNPKISQMFLTGSRDLGKLSADALARELPAITAGSVEDAPVTRPSAGEGAPELRPGGGK
TPALDQYTADLTEMARSGKMDNVSGRDAEIRQIIDILMRRRQNNPILTGEAGVGKTAVVE
GFAQRIAAGDVPPPLRNVSVRSLDLGLLQAGAGVKGEFENRLKSVIQEVKSSAKPIILFI
DEAHTLIGAGGQAGQNDAANLLKPALARGELRTICATTWSEYKQYFEKDAALTRRFQVVK
VEEPAEAQAEVMLQGLVKMLEKHHGLRILDEAISAAVRLSHRYITGRQLPDKAVSLLDTA
SARVAVGHSAIPAPIEDLTRQIEQIGMKLEILQREAATGANHAQRIAELNELQAKARGEL
EQTEARWKQETGIVQKICAIYDRLAGVAPKSGAGNGQPAAAPAPLTEEEAEQCRTDLAAL
QAELKQLQGETPLVQPCVNFQAVAEVVSGWTGIPAGRMQTDEIQLVSTLHERMTGRVIGQ
NHALQAISRRIQTARANLTDPRRPIGVFLLAGPSGVGKTETAMTLAELLYGGERNMVIIN
MTEFQQSHTTSSLIGSAPGLVGYGKGGKLTEAVRRRPYCVVLLDEIEKAHDDVLELFYQV
FDKGVLEDAEGREIDFKNTIILCTSNVGSDLIQSLCADPETRPEPDKLSEQLRPKLLERF
KPAFLGRMNVVPYFSLGDDVLRNIIQLQLGRIGQRLRENHRAELAWSEPVVDQILSRCRE
TETGARNVDHILTGTVLPDISRELLSRMAEERTVSRVEILLGDGGGFGYKFD
NT seq 2679 nt   +upstreamnt  +downstreamnt
atggacatcaatctgcggtcgctcgtcagcaagttgaacgacacctgccgacgggcgctg
gaaagcgccgccggcctgtgcctgtcgcggacgaattactcggtcgaggcggagcactgg
ctgcagaagctgctggaggtgcagaactcggacctgacgaagatcttcaagcactacgag
gtcgatcagagtcggctcgaagcggcgctgacgaagtcgatcgacagctttaagaccggc
aacgggcggccacctgcgctttcgccgctgctggtcgatctggtccgggacgcgtgggtg
tttgcctcggtcgaatacggcgagtcggcggttcgcagcggtcacctgctgctggcgatt
ctgacgaatccgaagatcagtcagatgtttctgacgggatcgcgggacctggggaaactg
tccgcggacgccctggcgcgggagctgccggcgattacggcggggtcggtggaagacgct
ccggtcacgcgcccgtcggcgggggaaggggcgcccgagcttcgtccggggggcgggaag
actccggctctggatcagtacaccgccgatctgacggagatggcgcgaagcggaaaaatg
gacaacgtgtcgggccgggacgcggagatccggcagatcatcgacatcctgatgaggcgt
cggcagaacaatccgatcctgacgggtgaagcgggagtcgggaagacggcggttgtcgaa
ggcttcgcccagcgaatcgccgcgggcgacgttccgccgccgctgcggaacgtctcggtc
cggtcgctggatctggggctgctgcaggccggggcgggggtgaaaggggagttcgagaac
cggctcaagtcggtgattcaggaagtgaagtcatcggcgaagccgatcatcctgttcatc
gacgaggctcacacgctgatcggggccggcggtcaggcggggcagaacgacgcggccaat
ctgctgaagccggcgctggcccgcggggaactgcggacgatctgcgcgacgacgtggtcg
gaatataaacagtatttcgagaaggatgcggctctcacccggcgttttcaggtggtgaag
gttgaggagccggcggaggcgcaggccgaggtgatgctgcaggggctggtgaagatgctg
gagaagcatcacgggctgcgcattctcgacgaagcgatttcggccgcagtgcgactctcg
catcgctatatcaccggtcgccagcttcccgacaaggcggtcagcctgctcgataccgct
tccgcccgggtcgcagtcgggcactcggcgataccggctccgattgaggatctgacgcgg
cagatcgaacagattggaatgaagctggagattctgcaacgggaagcggcaaccggggcg
aatcacgcccaacggattgcggaactgaatgaactgcaggcgaaggcgcgcggcgagctg
gagcagacggaggcgcgctggaagcaggaaacggggatcgtgcagaagatctgtgcgatc
tacgatcgcctggcgggagttgcaccgaagtcgggcgccggaaacggacagccagcggcg
gcgccggcgccgctgacggaggaagaagcggagcagtgccgaacagatctggccgcgttg
caggctgagttgaagcagctccagggggaaacgccgctcgtgcagccctgcgtcaacttt
caggcggtggccgaggttgtttccggctggaccgggattccggcggggcggatgcagacg
gatgagattcagcttgtttcgacgctgcacgagcgaatgacgggtcgggtgatcggacag
aaccatgcgctgcaggcgatcagccggcggatccagacggcgcgggccaatctgaccgac
ccgcgccggccgatcggcgtgtttctgctggcggggccgagcggggtcggcaagaccgag
accgccatgacgctcgccgagctgctgtatgggggcgagcggaacatggtgatcatcaac
atgaccgagtttcagcaatcgcacaccacgtcttcgctgatcggctcggcgccgggtctg
gtcggttacggcaagggcgggaagctgaccgaggcggttcgtcgcaggccgtattgcgtc
gtcctgctcgacgagatcgagaaggcgcatgacgacgtgctggagctcttctatcaggtc
ttcgacaagggggtgctggaggatgccgaggggcgggagatcgacttcaagaacacgatc
attctgtgtacttcgaacgtcggctcggatctgatccagtcgctgtgcgcggatccggag
acgcgtccggagccggacaaactgagcgagcagcttcgtccgaaactgctcgagcgattc
aagccggcatttctggggcgtatgaacgtcgtgccctatttctcgctgggagatgatgtt
ctgcggaacatcattcaactccagttggggcgaattggtcagcgattgcgggaaaatcac
cgggccgaactcgcctggtcggagccggtcgtcgatcagatcctgagccgctgccgggag
accgagaccggggctcgaaacgtcgaccatattctgacggggacggtgctgccggatatt
tcgcgcgagctgctgtcccggatggctgaggagcggacggtttcgcgcgtcgagattctg
ctcggcgacggaggcggattcggctacaaattcgactga

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