Planctellipticum variicoloris: SH412_003170
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Entry
SH412_003170 CDS
T09866
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
pvar
Planctellipticum variicoloris
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvar03021
]
SH412_003170 (nusA)
03009 Ribosome biogenesis [BR:
pvar03009
]
SH412_003170 (nusA)
Transcription machinery [BR:
pvar03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
SH412_003170 (nusA)
Ribosome biogenesis [BR:
pvar03009
]
Prokaryotic type
rRNA transcription factors
SH412_003170 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
S1
KH_NusA_C
HHH_5
KH_2
DUF7713
Cdd1
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
WLD13020
LinkDB
All DBs
Position
complement(4095265..4096623)
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AA seq
452 aa
AA seq
DB search
MNGSELLRIVDAIHRDKNIDKEIVFEGVEQAVLSAARKHFGEENEIVAQIDRASGNPTVH
CDGKEIDADELGDILGRISAQTAKQVMIQKIREAERDSVYDEFADLRHQIVSGTVTRVEG
GAAIVNLGKVEGFLPRGEQIPGEGFRVSERVRAIVLEVRKAGSRVKIILSRTHPEFVRRL
FELEIPEVAERVIEVRSLAREAGYRSKVAVSCIDNNIDAVGACVGVRGARIKNILDELCG
ERIDIVRWNDSLQVLVPNALQPAEVEDVILCPMLGRVIVLVRDDQLSLAIGKKGQNVRLA
SKLVGWDIEVMTREELDEQLDRAVGAFSVIPGVTPELAEGLVSQGFLSFDDLSVIEPDQL
MEMGELDEEQVDAIVAYAERESERLEQEERMRRAMEREQAAIGAAMDAAAAANAAAAEAA
AEAVASAVESAASAEDSPAKENAEQGERAASE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcagtgaacttcttcgaatcgtcgatgccattcatcgcgataagaatatcgat
aaagagatcgtcttcgagggggtcgagcaggccgtgttgtcggcggcgcgaaagcacttc
ggcgaagaaaacgagattgtcgctcaaatcgaccgggccagcggaaatccgaccgtccac
tgcgatggcaaggagatcgatgcggacgagctgggggacattctcggacggatttccgcc
cagaccgccaagcaggtgatgattcagaagattcgcgaggccgaacgcgattccgtctac
gacgaattcgccgatctgcggcatcagattgtctcggggacggtgacgcgggtcgagggg
ggcgccgcgatcgtgaacctcgggaaggtggaaggctttctgccgcgcggcgagcagatt
ccgggcgaaggcttccgcgtttcggaacgcgtgcgggcgatcgtgctggaggtccgcaag
gctggcagccgggtcaagatcatcctgtcgcggacccatccggagtttgtgcgacggttg
ttcgagctggagattccagaagtcgcagagcgagtcatcgaggtccggtcgctggcccgg
gaagcgggctaccggtcgaaagttgcggtttcgtgtatcgacaacaacatcgacgccgtc
ggcgcctgcgtcggcgttcgcggtgcccgcatcaaaaatattctggacgagctgtgtgga
gagcggatcgatatcgtccgctggaacgattcgctgcaggtgctggttcccaacgcgctg
cagccggccgaagtggaagacgtcattctgtgcccgatgctgggacgcgtgatcgtcctg
gtgcgagatgaccagttgtcgctggcgatcggcaaaaaggggcagaatgtccggctggca
tcgaagctggtcggctgggacatcgaagtgatgacccgcgaagagctggacgaacagctc
gaccgggcggtcggggcgttttcggtgattccgggagtcactccggaactggcggaaggt
ctggtgtcgcagggtttcctcagcttcgacgatctgtcggtgatcgagcccgatcagttg
atggagatgggcgaactcgacgaggagcaggtcgacgccatcgtggcctatgccgaacgg
gagagcgagcggctcgaacaggaagagcggatgcggcgggcgatggaacgggagcaggcg
gcgattggtgcggcgatggacgctgcagccgccgccaacgccgcggcggcggaagctgcc
gcggaggccgttgcgtcggctgtcgaaagcgcagcgtcggccgaagacagcccggcaaaa
gagaacgcagagcagggggaacgcgcggcaagcgaatag
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