Planctellipticum variicoloris: SH412_003371
Help
Entry
SH412_003371 CDS
T09866
Name
(GenBank) DEAD/DEAH box helicase
Organism
pvar
Planctellipticum variicoloris
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SNF2_assoc
Motif
Other DBs
NCBI-ProteinID:
WLD13217
LinkDB
All DBs
Position
complement(4345549..4348872)
Genome browser
AA seq
1107 aa
AA seq
DB search
MTLSELMESKFRGDIKFRGAAYLQAERVSVVRVTPESLFAVVRDGVEYQTQLSRDETSLK
LSCSCMGTSANPSSNPHCKHLWATVLATDAGNYLTGAAKPGYVPPFAVEDDPFNLELPLD
DWDEEDDVPVGETRLAVKTAERVKKVAVAPPPLREWETKLSELRRAMHDDDPSAAAGQGA
ERQIFYEIDVAGSDDAETIIIQTSQRQRRANGEWGKLKPLKLKPGRFEEIDDDEDRRILA
HLVGGTPDRTSGNATETFAAAHRYRVPYDLCQLLLPAMCSTGRVRLAGDERVTDILQWDD
GGLWELCLQVEQSPEKDTWRLHGLLRRGEERLSIREPELLVPGGLFVTPKFIAPFEDFDA
FSWAPLLRRTDDIQVPSGEEHELVDRLLDMPALPRLELPPELTLEEVTFTPAPQLSVHAP
GKSRWQHDRLKAEVLFSYDGATVRGSSPRWAIVQRHASRCLLRDRQREAELWSQLQDNGF
RRLLDQRRGQHDVEVNARDLGHAVRRLVGLGWQIRADGKQVRQPQEMKFQVRSGLDWFEL
HGDVDFDGQRVSFPELLAALARGDGTILLDDGSLGILPEEWINRWGGLAGLGQADGEHLR
FSMVQAGLLDALLSTQPSVDYDAQFTDTCQRLRDFEGIQQVKEPASFRGELRPYQREGVG
WLKFLEDFRFGGCLADDMGLGKTIQMLAFLEARRKRAEKKRPTLVVVPKSLLFNWQQEAE
KFTPDMKVLEYTGLERAKLRTDFEKYHLILTTYGTLRRDVLILKDVEFDYVVLDEAQAIK
NAGSQVAKATRVLQAQHRIALSGTPIENHLGDLCSIFDFLNPGMLGRSSVFRLHAADPTD
TETRRVLASGLKPLILRRTKQSVASELPEKLEQTIYCEMGEEQQRLYNELRDHYRDSLLG
MVAEQGMARVKMHVLEALLRLRQAACHPALLDRATADDSSAKLDALCPQLEEILEEGHKA
LVFSQFTSMLSIVKKHLDHRNITYEYLDGQTRDRKERVERFQTDDKCGVFLISLKAGGLG
LNLTAADYVFILDPWWNPAVETQAIDRAHRVGQTRPVFAYRLICKGTVEEKIADLQQQKR
ELADAILEQNNSLMQGLTTDDLKLLLS
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgtcggagttgatggagagtaagtttcgcggcgacatcaagtttcgcggcgct
gcataccttcaggcggagcgggtctcggtcgttcgcgtcaccccggaaagtctcttcgcc
gtggttcgcgacggcgtggaatatcagacacagctttcccgcgacgaaacgagcctgaag
ctgtcgtgcagttgcatggggacatcggcgaacccttcgagcaatccccactgcaagcac
ctctgggccaccgttctggcgaccgacgccggcaactacctcaccggcgccgccaagccc
ggttacgtgccgcccttcgccgtcgaggacgatccgttcaatctcgaactgcccctcgat
gactgggacgaagaagacgacgtcccggtcggcgagacgcgacttgccgtcaagaccgcc
gaacgcgtcaagaaagtcgccgtcgccccgccgccgctgcgcgagtgggaaacgaaactc
agcgagctccgccgggcgatgcacgacgacgatccgtcggcagccgccgggcagggggcc
gaacggcagatcttttacgaaatcgacgtcgccggcagcgacgacgccgaaacgatcatc
attcagacctcgcagcggcagcgccgggccaacggcgagtggggaaagctgaagcccctc
aagctgaagccgggccgcttcgaggaaatcgacgacgacgaagaccgccggattctcgcc
cacctcgtcggcggaacccccgaccggacctccggcaatgcgaccgaaaccttcgccgcc
gcgcaccgctatcgcgtcccctacgacctctgccagcttctactgcccgccatgtgcagc
accgggcgcgtacgcctcgccggcgacgaacgcgtcaccgacattctgcagtgggacgac
ggcggactttgggaactctgcctgcaggtcgaacagtcccccgaaaaagacacctggcgg
ctccacgggttgttgcgtcgcggcgaagaacgcctctcgattcgcgagccggagttgctc
gtgccgggcggattgttcgtcactccgaaattcatcgccccgttcgaggattttgacgcc
ttctcctgggccccgctcctgcgacgcacggatgacattcaggtccccagcggcgaagaa
cacgagctggtcgaccggctgctcgatatgcccgccctgccgcggctcgaactccctccc
gagctgacgctcgaagaagtcacgttcacgccggcgccgcaattgtcggtgcatgccccc
ggcaagtcgcgctggcagcacgaccgcctcaaggccgaagtcctcttcagctacgacggc
gccaccgtgcggggctccagcccccgctgggccatcgtccagcggcatgcttcgcgctgc
ctgctgcgcgaccgccagcgcgaagccgaactctggtcgcaattgcaggacaacggcttc
cgccggctgctcgatcagcgccgcggccagcacgacgtggaagtcaacgcccgcgatctg
ggccacgcagtccgtagactggtcggcctcggctggcagatccgcgccgacggcaaacag
gtccgtcagccgcaggaaatgaagttccaggtccgctccgggctcgactggttcgaactc
cacggcgacgtcgatttcgacgggcaacgcgtcagcttccccgaactgctggccgcattg
gcccgcggcgacggcaccattctcctcgacgacggttcgctggggattctccccgaagag
tggatcaatcgctggggcgggctggcgggactcggccaggccgacggcgagcacctgcgc
ttcagcatggtccaggccggcctgctggacgccctgctttcgactcaaccctcggtcgac
tacgacgcgcaattcaccgacacctgccagcgtctgcgggatttcgaagggattcagcag
gtcaaggaaccggcgtcgttcaggggcgaactccgaccctaccagcgcgaaggggtcggc
tggctgaagttcctcgaagacttccggttcggcggctgtctggcagacgacatgggtctc
ggcaaaaccattcagatgctggctttcctggaagcccggcggaaacgggccgagaaaaaa
cgaccgacgctcgtcgtcgtccccaagtcgctgctgttcaactggcagcaggaagccgaa
aagttcacgccggatatgaaagtcctggagtacaccgggctcgaacgcgccaagctgcgg
accgacttcgagaagtatcacctgatcctcacaacgtacggcacgctccgccgggacgtg
ctgatcctcaaggacgtcgagttcgactacgtcgtcctcgacgaggcccaggcgatcaag
aacgccggttcgcaggtcgcgaaagccactcgcgtgctgcaggcgcagcaccgcatcgcc
ctcagcggtacgcccatcgaaaaccacctgggcgatctctgctcgatcttcgatttcctc
aatcccggcatgctgggacgcagctcggtcttccggctgcacgccgccgaccccaccgac
accgaaacccgccgcgtcctggcaagcggcctgaaaccgctgattctccgccggaccaag
cagagcgtcgccagcgaactgcccgaaaagctggagcagacgatctactgcgaaatgggc
gaggagcagcagcggctctacaacgaactgcgggaccactaccgcgattcgctgctgggc
atggtcgccgaacaggggatggcccgcgtgaaaatgcacgtcctcgaagccctgctgcga
ctccggcaggccgcctgtcacccggccctgctggaccgggccaccgcggacgattcgagc
gccaagctcgacgccctctgcccgcagctcgaagaaatcctcgaggaaggccacaaggcg
ctggtcttctcccagttcaccagcatgctgtcgatcgtcaagaagcacctcgaccaccgc
aacatcacctacgagtacctcgacggccagactcgcgaccgcaaggaacgggtcgagcgg
ttccagaccgacgacaagtgcggcgtgttcctgatcagcctgaaggcgggcggcctgggt
ctcaacctcacggccgccgactacgtcttcatcctcgatccctggtggaacccggccgtg
gaaacccaggcgatcgaccgcgcccaccgcgtcggccagacccgcccggtcttcgcctac
cggctcatctgcaagggaaccgtcgaagagaagatcgccgacctgcagcagcagaaacgc
gaactcgccgacgccatcctggaacagaacaacagcctgatgcagggcctcaccacggac
gatctgaaactgctgctgtcttga
DBGET
integrated database retrieval system
