Planctellipticum variicoloris: SH412_003724
Help
Entry
SH412_003724 CDS
T09866
Name
(GenBank) efflux RND transporter permease subunit
KO
K07787
copper/silver efflux system protein
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SH412_003724
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvar02000
]
SH412_003724
Transporters [BR:
pvar02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SH412_003724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WLD13552
LinkDB
All DBs
Position
complement(4795884..4799393)
Genome browser
AA seq
1169 aa
AA seq
DB search
MIEKLLAFCIRERMLVALASIVIVAWGWYATQKVPLDAIPNVGENQVIVLVEWLGRSPKD
VEDQVTYPLSVALQAVPGAKSVRGRSMFGFSFVQVTFDDAVDFYWARSRVAEQLTTASGS
LPDGVTPVLAPDATALGQIYYYVLEGPPGMDLAELRSKQDFFVKYALQSVDGVAEVASVG
GYVKQYQVDVDPDKLRFHNLPLQKVIVAVEAANIDVGAKTVEMSGMEFIVRGKGFIGSGR
TELETIEQIENTVVIEREGIPVRVRDLAQVQTGPAFRDGALDYNGHEAVGGIVVMRYREN
PRDVILRVRDKLKSLEPELGGVRIHGVYDRTLLIDETVTTLTDSIGQETLITIVVMVLFL
LHVRASIVIAITLPMAVLMSFIGMKVFQVDANIMSLAGIAIAVGTMVDMGIIILENIYGA
LSEWEEAGSPGGAQQRLKVIRESAAEVVPAVMTAVSTTVVSFLPVFFLTGRDHKLFAPLA
WTKTFALVSSLIVAVTVIPMLCRVFLRSSRLPRWSAWLAGTGTASLAASLCHFVWADHVT
SWTTLSLPWATGLAGTIGFVGGFLVTRERIWPIEQNPVSRLLRWLYGGRLRLALNHKGLM
LSFPAMVVLLGFGAWFGLPTVLRPVEQLVSLTGSDLNEIPGYVDAKHVFTGLKSDDWIAL
DEGTWFYMPSLYPAASFNQAMEILQAQDTLIGQIPEVANVLGKIGRAQSALDPAPVAMVE
TYVMLKPRDQWRPGMTERKVWDEINAVATLPGVTPASPLQPIEGRVVMLQAGIKASMAVR
IYGGTLDGLAKAALAVAEQLRDHPLVNSRTVNPDIVMGKPYVEFEVDREEAARYGMTTMM
VNQIVAAGLGGVDVTTTVEGRERYPIQIRFSRDVREHADELSQIPVVTETDDVVPLARLA
DVTTTWGPGMINSEDSRLVAHVMFSPSGAAGDLETVDGVMKALTAARESGKLSFPEGNFE
LQPVGSFQNQIEANRRLMWIIPLVVLINFLLIYLEFRNVPIALTVFTALPVSFAGGMILV
ALMGVELNTAVWVGFIATFGLAEDDGVVMATYIRQLLKRRTIRSVEDIRNTVYEAGLKRI
RPCMMTTITTLVALVPVIVATGRGADVARAMAWPVLGGMLVEPFASFIVPTLYSAYLEFK
FRAGLRDEIWDAPTEPIETMAAPSEPRAA
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagaaacttctcgccttctgcattcgcgaacggatgctggtcgccttggcatcg
atcgtcatcgtcgcctggggctggtatgcgacgcagaaggtccccctcgacgcaatcccg
aacgtgggcgaaaaccaggtcatcgtgctcgtcgagtggctcgggcgatcccccaaggac
gtcgaagaccaggtcacctatcccctgtcggtggccctgcaggcggtccccggcgcgaag
agcgtccgtggccggagtatgttcggtttcagcttcgtccaggtgacgttcgacgatgct
gtcgacttttactgggcacggtcgcgtgttgccgagcagttaacgacggcgtcggggtcg
ctgccggacggtgtgactccggtgcttgccccggacgccaccgccttgggccagatctac
tactacgtgctcgaaggtccgccgggcatggacctggcggaactccgctcgaagcaggat
ttcttcgtcaagtacgcgttgcagtcggtcgacggcgtcgcagaagtcgcgtcggtcgga
ggctacgtcaagcagtaccaggtcgacgtcgatcccgacaagctccgcttccacaacctc
ccgctgcagaaggtcattgtggcagtcgaggccgccaacatcgacgtcggggcaaagacg
gtcgaaatgagcggaatggagttcatcgtccgtgggaaaggcttcatcggctcggggcgg
accgaactggagacgatcgagcagattgagaacacggtggtgatcgaacgggaggggatt
ccagttcgcgtccgggacttggcgcaggtccagaccggcccggcgtttcgtgacggggct
ctcgattacaacggccatgaggcggtgggcggcatcgtcgtcatgcgctatcgcgagaat
ccgcgcgacgtcatcctgcgggtgcgcgacaagctgaagtcgctggagcccgaacttggc
ggggtcaggattcacggtgtttacgaccgcacgctgctgatcgacgaaacggtcaccacg
ctgaccgattcgatcgggcaggaaacgctgatcacgatcgtggtgatggtgctgttcctg
ctgcacgtgcgggccagcatcgtcattgcaattacgctgccgatggccgtactgatgtcc
ttcatcggcatgaaggtgttccaggtcgacgcgaacatcatgtcgctcgcgggcatcgcc
atcgccgtcggcacgatggtcgacatgggaatcatcatcctagagaacatctacggcgca
ctctccgaatgggaagaagccggatcgcccggcggagcccagcagcgtctgaaagtcatc
cgcgagtcggccgcggaggtcgtccccgccgtgatgaccgccgtcagcacgacggtcgtg
agttttctgccggtcttcttcctgaccggtcgcgatcacaagctatttgcccccctggcc
tggaccaagacgtttgcgctcgtgtcgagcctgatcgtcgccgtgacggttatcccgatg
ctgtgccgggtcttcctgagaagctcccggctgccgcgctggtcggcgtggctggccggc
actggaacggccagcctggcggcgtctctgtgtcatttcgtctgggccgaccacgtcacg
agctggacgacgttgagccttccgtgggcgacgggccttgccggcacaatcgggtttgtc
ggcggcttcctcgtgacgcgggagcgcatctggccgatcgagcagaaccccgtcagccgg
ctgctccgctggctctatggcggtcgtctacgtttggcgctgaaccacaagggcctgatg
ctgtcgtttccggcaatggttgtcctgctcggcttcggggcatggttcggactgccgacg
gtcctccgaccggtcgaacagcttgtgtcgctgaccggctctgacctgaacgagatcccc
ggctatgtcgacgccaagcacgtctttaccggcctgaagtcggatgactggatcgcgctg
gatgaaggaacctggttctacatgcccagtctctaccccgcggccagcttcaaccaggcg
atggagattttgcaggcgcaggacactctgatcgggcagattccggaagttgccaacgtg
ctcggcaagatcggacgcgcccagtcggcccttgaccccgccccggtcgcgatggtcgaa
acgtacgtgatgctcaagccgcgcgaccagtggcgacccggcatgaccgagcggaaggtc
tgggatgagatcaacgccgtggcgacgttgcccggcgtgacgccggcgtcaccgctgcag
ccgatcgagggtcgcgtcgtcatgctgcaggctggcatcaaggcctcgatggctgtgcgg
atctatggcggcacgctcgacggcttggccaaagcggccctggcggtcgcggagcagttg
cgagaccacccgctggtcaacagccgcacggtcaatcccgacatcgtgatggggaagccg
tacgtcgagttcgaggtcgaccgggaagaggcagcccgttatggcatgacgacgatgatg
gtaaaccagatcgtcgccgcggggctcggtggagtggacgtcacgacgactgtggaaggt
cgggaacggtatccgattcagatccgtttcagccgcgacgttcgcgaacacgccgacgag
ctgtcgcagattcccgtcgtcacggagacggacgatgtcgtgccgctcgcccgcctggcc
gacgtcacgacaacgtgggggccgggcatgatcaacagcgaagattcacggctggtggcg
catgtgatgttctctccatccggagcggctggcgatctggaaaccgtggacggggttatg
aaggcgctgacggccgcgcgggagagtggcaagctctcgtttcccgaggggaacttcgag
ttgcagccggtcggatcgtttcagaaccagatcgaggcgaaccgccggctgatgtggatc
atcccgctcgtggtcctgatcaactttctgctgatatacctggaattccgcaacgtcccg
attgcgctgacggtctttaccgcactgccggtttcgttcgcgggcgggatgatcctcgtc
gcactaatgggggtcgagttgaacacggcggtgtgggtcggcttcattgccacgttcggg
ctggcggaagacgacggagtcgtgatggcgacctatatccgccagctcctgaagcgccgg
acgatccgctcggtggaagacattcgcaacaccgtttacgaggccggcttgaagcggatc
cgtccctgcatgatgaccacgattaccacgctggtcgcgctggttcccgtgatcgtcgcc
acggggcgcggcgccgacgtcgcccgcgccatggcctggccggtcctcggaggcatgctc
gtcgagccattcgcctcgttcatcgtaccgacgctgtatagcgcctatctggaattcaag
ttccgggccgggctgcgggacgaaatctgggatgccccgaccgaacccattgaaacaatg
gccgcgccttcggaaccacgtgcggcttag
DBGET
integrated database retrieval system
