KEGG   Planctellipticum variicoloris: SH412_003901
Entry
SH412_003901      CDS       T09866                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pvar  Planctellipticum variicoloris
Pathway
pvar03030  DNA replication
pvar03410  Base excision repair
pvar03420  Nucleotide excision repair
pvar03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pvar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SH412_003901 (polA)
   03410 Base excision repair
    SH412_003901 (polA)
   03420 Nucleotide excision repair
    SH412_003901 (polA)
   03440 Homologous recombination
    SH412_003901 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvar03032]
    SH412_003901 (polA)
   03400 DNA repair and recombination proteins [BR:pvar03400]
    SH412_003901 (polA)
Enzymes [BR:pvar01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SH412_003901 (polA)
DNA replication proteins [BR:pvar03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     SH412_003901 (polA)
DNA repair and recombination proteins [BR:pvar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     SH412_003901 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SH412_003901 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 TraI_hel_assoc_N
Other DBs
NCBI-ProteinID: WLD13728
LinkDB
Position
complement(5031525..5034635)
AA seq 1036 aa
MSQLPSLIVSNTVVKNFRGARGVCGAGLRRSAANVPVGADTRAHVSRLCFDEPGGGLRSK
PGAKIDSAANSISVPILTVALVETRLRHHNFLRDLSIYRASGSAVAPPSRTAPMAETVYL
VDSFSLIFQVFHAIPPMTSPAGQPTNAVFGFSRDLVTLLKDHRPGWLICAWDSSGPGERL
GIFPDYKANRAEMPEDLRPQIGLVREVIEAFRIPLIEFPGWEADDVIATLTREAVEHGRD
VRIVTSDKDARQLLGPQVKLFNFRKNSYLDETGLLEDWGVRPDQVVDFQSLVGDAVDNVP
GIPLIGPKKAAQLLKDWQTLEDVLANAEHAPGAKLRENLKKFADQARMSRELVRLRTDLP
LVFDWEASRCTQPDVHHLQDVFRRLGFRKLVDDVKQFAPPVAKVVARGLFDDEPESEPAP
QPEHPGQVAQDRCWETVDTPEKLTAFVTELSSQSRFCVDLETTGLDPLQSRIVGWAFSWT
AGTGHYLPVLGPAGSQLLNHDDVLRSLQPILEREDIEVINQNIKFDLIVLRAAGIRIRNL
GLDPMVGDYLLDAGARSHNLETLIDKYLHRPSISIKELIGSGAKQKRMDEIAVEKVAEYA
TEDADCSLQIADLIRPQLEADHLWKLYWDLERPLIHVLADMEYRGIRVDAAELRAQSETL
TLQLETLMHEIHDLAGHPFNIDSPIQLRTVLFEEQGLPVRKKTKTGPSTDQDVLEELATL
RPDNPLPLKIIEHRQMSKLKGTYLDALPALINPQTGRIHASFNQVVAATGRLSSSDPNLQ
NIPIRTPAGRQVRKAFVPENPDWRLVCADYSQIELRMLAHFSRDPVLVEAFANGVDIHTA
VAADVFGVDRQDVDSDMRRVAKAVNFGVIYGQSPYGLAAALGITQDDAARFIDEYFSRYA
GVDAFLDQTLVECAKTGYARTILGRRRAIEGLRSERSRNRTMPERTAINTVIQGSAADLI
KQAMIRVHNRLERDQHPARLLLQIHDELVLESPVDAVPSLVALVKAEMEHALTLDVPLIV
DVSVGQNWLDIEDVES
NT seq 3111 nt   +upstreamnt  +downstreamnt
ttgagtcaacttcccagtctgatcgtctcgaatacggtcgtcaagaactttcggggcgcc
cgaggggtctgcggggccggacttcgtcgatcggcggcgaatgttccggtcggagcagac
acgcgggcgcacgtctccagactctgtttcgacgaaccgggcggaggactccgttcgaaa
ccgggagcaaagatcgactccgccgcgaactcgatcagcgtaccgattctgacggtggcg
ctggtggaaacgcggctgcggcaccataatttcctgcgagacttaagtatttaccgggct
tccggttctgccgttgctcccccatcgagaaccgcccccatggccgagaccgtctatctt
gtcgacagcttctcgctgatcttccaggttttccatgcgatccccccgatgaccagcccg
gcgggacagcccacaaacgccgtgttcgggttcagccgggatctggtgaccctgctgaaa
gatcatcgtcccggctggctgatctgcgcctgggattcctccgggccaggtgaacgcctg
gggatctttccggattacaaagccaaccgtgcggaaatgcccgaggatctgcggccacag
atcggacttgtccgggaagtgatcgaagcctttcggattccgctgatcgagtttccgggg
tgggaagcggacgacgtgatcgccacgctcacgcgggaagcggtcgagcacggccgggat
gtccgcatcgtcaccagtgataaagacgcacgacagctcctcggcccgcaggtcaaactg
ttcaattttcgcaaaaacagctacctcgacgaaacggggctgctcgaggactggggagtc
cgccccgatcaggtcgtcgattttcagtcgctcgtcggtgacgccgtcgacaatgtgccg
gggattccgctcatcggccccaaaaaagcggcccagctcctgaaggactggcagaccctg
gaggacgtgctggccaatgccgagcatgctcccggagccaaattgcgggagaacctgaag
aaattcgcggatcaggcccgcatgagccgggaactggtccggctgcggaccgacttgccg
ctggttttcgactgggaagcctctcgatgcacccagccggacgtgcatcaccttcaggat
gtcttccgccgcctcggcttccgcaagctcgttgatgacgtgaaacagtttgcgccgccg
gtggcgaaggtcgtcgcacgcggattatttgacgacgaaccggaatcggagccggcgccc
cagcccgagcacccgggccaggtcgctcaggatcgatgctgggagaccgtcgacactccg
gaaaaactgacagcgttcgtcacagagctttcgtcgcaaagccgcttctgcgtggacctt
gagacgacaggactcgatccgctgcagtcgcggatcgtcggctgggcgttcagttggacg
gctggaaccggccactatctgccggtgctaggccctgccggaagccagcttctcaaccac
gacgacgtgctgagatcgctccagccgatcctggaacgggaagacattgaggtgatcaat
cagaacatcaagttcgacttgatcgtcttgcgggctgccgggatccgaatccggaatctc
gggctggatccgatggtcggagactatctgctcgacgccggagccaggtcgcataatctg
gaaacgctgatcgataagtacctgcatcgcccgtcgatttcgatcaaggagctgatcggc
agtggtgcgaaacagaagcgaatggacgagatcgccgttgaaaaggtcgccgagtacgcg
acggaagacgcagactgctcactgcagatcgccgacctgatccgcccgcagcttgaggcc
gatcacctctggaaactgtactgggatctggaacgaccgctgattcacgtcctggcggat
atggaatatcgcggcatccgcgtcgacgccgcagaactgcgggcgcagagcgaaacgctg
acgctccagctcgaaacgctgatgcacgaaatccatgatctggcgggccatccgttcaac
atcgactcgccgattcagttacggacggtcctgttcgaagagcagggactgccagtccgc
aaaaagacgaaaaccggccccagcaccgatcaggatgtgctggaagaactggcaacgctc
cgccccgacaatcccctgccgctcaaaatcatcgagcatcggcagatgtcgaagctcaag
ggaacctacctggacgcgctgccggcgctgatcaacccgcagaccggccggattcacgcg
tcgttcaaccaggtggtcgcggcgaccggccggctcagttcgagcgaccccaacctccag
aacattcccatccggaccccggcaggacgccaggtccgcaaagcgttcgtcccggagaac
cccgactggcggctcgtgtgtgcggactattcgcagatcgaactgcggatgctggcccac
ttcagccgggacccggtgctggtggaagccttcgccaacggcgtcgacattcacacggcg
gtcgcggcggatgtgttcggagtcgaccggcaggacgtcgacagcgatatgcgccgggtc
gccaaggccgtcaacttcggcgtaatttacggacaaagcccctatggcctggcggcggct
ctgggaatcacccaggacgacgccgcccgatttatcgacgaatacttcagccggtatgcc
ggagtcgacgccttcctggatcagaccctggtcgagtgcgcgaaaaccggctatgcacgg
acgatcctcgggcgacggcgggcgatcgagggattgcgctccgagcggtcgcgcaatcgg
acgatgccggagcggactgctattaatacagtcattcagggctcggcggcggacctgatt
aagcaggcgatgatccgagtccacaaccggctggagcgggaccaacacccggcccgcctg
ctgctccagatccatgacgaactggtgctggaatcgcccgtggacgcggttccgtcactg
gtcgcgctggtgaaagcagagatggaacacgcgctgactctcgacgtaccgctgatcgtg
gacgtttccgtcggccagaactggctggacatcgaagacgttgagagttga

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